GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003952-TA|BGIBMGA003952-PA|undefined
         (185 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   5.5  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   7.3  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    21   7.3  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    21   7.3  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 27  RRPSQLPLQLGR-APDVDPTPSPVHHRLRNE 56
           RR ++   + G   P   P P P H RLR E
Sbjct: 89  RREAESEAEPGNNRPVYIPQPRPPHPRLRRE 119



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44 PTPSPVHHRLRNE 56
          P P P H RLR E
Sbjct: 51 PQPRPPHPRLRRE 63



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44 PTPSPVHHRLRNE 56
          P P P H RLR E
Sbjct: 79 PQPRPPHPRLRRE 91



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44  PTPSPVHHRLRNE 56
           P P P H RLR E
Sbjct: 133 PQPRPPHPRLRRE 145


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
          protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44 PTPSPVHHRLRNE 56
          P P P H RLR E
Sbjct: 50 PQPRPPHPRLRRE 62



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44 PTPSPVHHRLRNE 56
          P P P H RLR E
Sbjct: 78 PQPRPPHPRLRRE 90



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44  PTPSPVHHRLRNE 56
           P P P H RLR E
Sbjct: 134 PQPRPPHPRLRRE 146



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44  PTPSPVHHRLRNE 56
           P P P H RLR E
Sbjct: 190 PQPRPPHPRLRRE 202



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44  PTPSPVHHRLRNE 56
           P P P H RLR E
Sbjct: 218 PQPRPPHPRLRRE 230



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44  PTPSPVHHRLRNE 56
           P P P H RLR E
Sbjct: 246 PQPRPPHPRLRRE 258


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
          protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44 PTPSPVHHRLRNE 56
          P P P H RLR E
Sbjct: 51 PQPRPPHPRLRRE 63



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44 PTPSPVHHRLRNE 56
          P P P H RLR E
Sbjct: 79 PQPRPPHPRLRRE 91



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44  PTPSPVHHRLRNE 56
           P P P H RLR E
Sbjct: 107 PQPRPPHPRLRRE 119


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
          protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44 PTPSPVHHRLRNE 56
          P P P H RLR E
Sbjct: 22 PQPRPPHPRLRRE 34



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44 PTPSPVHHRLRNE 56
          P P P H RLR E
Sbjct: 50 PQPRPPHPRLRRE 62



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44 PTPSPVHHRLRNE 56
          P P P H RLR E
Sbjct: 78 PQPRPPHPRLRRE 90



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44  PTPSPVHHRLRNE 56
           P P P H RLR E
Sbjct: 106 PQPRPPHPRLRRE 118



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44  PTPSPVHHRLRNE 56
           P P P H RLR E
Sbjct: 134 PQPRPPHPRLRRE 146



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 44  PTPSPVHHRLRNE 56
           P P P H RLR E
Sbjct: 162 PQPRPPHPRLRRE 174


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.132    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,881
Number of Sequences: 429
Number of extensions: 1834
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of query: 185
length of database: 140,377
effective HSP length: 54
effective length of query: 131
effective length of database: 117,211
effective search space: 15354641
effective search space used: 15354641
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 41 (20.6 bits)