GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003946-TA|BGIBMGA003946-PA|IPR001370|Proteinase
inhibitor I32, inhibitor of apoptosis
         (136 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    24   0.66 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   2.7  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   6.2  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     20   8.2  

>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 61  LDGWESTDDPW-IEHKSHAAQCAFVQLGKKEDDLLLSENLSVIKQYMINETKQI 113
           LD   + +  W I H SH+      + G      LLS N+ + + Y +N T  +
Sbjct: 198 LDDMYNNNTEWEIVHMSHSESTIDSKFGLGFTTDLLSYNILLRRHYSMNSTTYV 251


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 7/42 (16%)

Query: 14  RIKTFKNWPFNDKNKCN-------VRNMAEAGFYSVATGVED 48
           ++  + NW  ND NK +       VR  A    + V TGV+D
Sbjct: 91  KLNPYPNWEMNDINKIDSIINIIRVRVDACDRLWGVDTGVDD 132


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 6/16 (37%), Positives = 9/16 (56%)

Query: 15  IKTFKNWPFNDKNKCN 30
           I  + NW +ND   C+
Sbjct: 103 IAPYPNWSYNDVKYCD 118


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 67  TDDPWIEHKSHAAQCAFVQLGKKEDDLLLS 96
           T+D      S+    + +Q   K+DDL+L+
Sbjct: 243 TEDTQERRLSNKGSISKLQFHNKDDDLILT 272


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.132    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,757
Number of Sequences: 429
Number of extensions: 1070
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 136
length of database: 140,377
effective HSP length: 52
effective length of query: 84
effective length of database: 118,069
effective search space:  9917796
effective search space used:  9917796
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
S2: 40 (20.2 bits)