GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003945-TA|BGIBMGA003945-PA|IPR001128|Cytochrome P450,
IPR002401|E-class P450, group I
         (536 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...   308   8e-86
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   117   2e-28
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    58   2e-10
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    25   1.6  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   6.4  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    23   8.4  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    23   8.4  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   8.4  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score =  308 bits (756), Expect = 8e-86
 Identities = 176/525 (33%), Positives = 274/525 (52%), Gaps = 35/525 (6%)

Query: 8   LLIWAVVLIAAFVLFYKQAYSLFSKHGVKGFTPLPFFGNMGRIVIKMDHFSDHIQSLYDS 67
           +L    VL  A   +    +  +   GV G  P+PFFG    +++     +  ++ +Y+ 
Sbjct: 7   ILCGIAVLFLALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDIYEK 66

Query: 68  FPEERFVGRYEFLNPMVIIRDIELLKKITVKDFEHFLDHRTIINKDTDPFFGRSLFFLRD 127
           +  E  VG Y   +P +++ D EL+K I ++DF  F +    + + T+P     L  L  
Sbjct: 67  YKNEPMVGLYATRSPFLLLNDPELIKDILIRDFSKFANRGLGVFERTEPL-SPHLLNLEV 125

Query: 128 QDWKDMRSTLSPAFTSSKMKLMMPFIVEVGEQMNKALKQRIQEAGVGYVDIDSKDLTTRY 187
           + W+ +RS LSP FTS K+K M   I+E    +   L + I++       I+ ++LT R+
Sbjct: 126 ERWRPLRSRLSPIFTSGKLKEMFYLIIECSLNLETYLDKLIEKNE----PIECRELTARF 181

Query: 188 ANDVIASCAFGLKVDSITEENNQFYAMGKAASTFNFRQLLIFFGLASVPKLVKILRITLF 247
             DVI SCAFG+ + S+T EN++F  MG+     NF  ++       +P+L  +L   + 
Sbjct: 182 TTDVIGSCAFGIDMSSMTNENSEFRRMGREVFAVNFMNVMRMKLKQFMPRLYDLLGYVMP 241

Query: 248 QKEIKTFFRELILGTMKNREAQNIIRPDMIHLLMEAKKGKLRHDEKSTKDSDAGFATVEE 307
            +    FF  ++  T+K R   NI+RPD I++LME +K   + +                
Sbjct: 242 DRTFAPFFTRVVTDTIKYRNDNNIVRPDFINMLMELQKNPQKLE---------------- 285

Query: 308 SSVGKKDINRVWTDDDLVAQAVLFFVAGFETVSSAMTFLLHELALNPEVQEKLVEEIREN 367
                   N   TD  + AQA +FF+AGFET S+ M+  L+ELALN +VQ+KL EEI   
Sbjct: 286 --------NIKLTDSLIAAQAFVFFLAGFETSSTTMSNALYELALNQDVQKKLREEINTF 337

Query: 368 EKNNNGKFDYNSIQNMVYLDMVVSEVLRLWPPVIALDRMCVKDYNLGKPNDKSKEDFIIR 427
              NN +  Y+ I+ M YLD V  E LR++PP   L R  + DY     ND       I 
Sbjct: 338 CPKNNKELKYDDIKEMEYLDKVFKETLRMYPPASILMRKAISDYTF---NDTK---ITIP 391

Query: 428 KDVAVGIPVWGLHRDPEFFPNPLKFDPERFSEENKHNIKPFSYMPFGLGPRNCIGSRFAL 487
           K++ + IP + +HRD   +PNP  FDPERF ++   +  P  Y+PFG GPRNCIG+RFA+
Sbjct: 392 KEMKIWIPAFAIHRDSAIYPNPDSFDPERFDQDAMASRHPMHYLPFGDGPRNCIGARFAV 451

Query: 488 CEVKVMTYQLLQHMEISPCEKTCIPSKLSKETFNLRLEGGHWIRL 532
            + KV    +L++ ++  CEKT IP +     F L  + G ++++
Sbjct: 452 YQTKVGLITILRNHKVEVCEKTIIPYEFDPGAFLLSPKDGIYLKI 496


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  117 bits (282), Expect = 2e-28
 Identities = 105/435 (24%), Positives = 193/435 (44%), Gaps = 43/435 (9%)

Query: 95  ITVKDFEHFLDHRTIINKDTD-----PFFGRSLFFLRDQDWKDMRSTLSPAFTSSKMKLM 149
           I  +D E  L     I+K T+     P+ G  L     Q W++ R  ++P F    + ++
Sbjct: 94  IDPRDVEIILSSNVYIDKSTEYRFFKPWLGDGLLISTGQKWRNHRKLIAPTF---HLNVL 150

Query: 150 MPFIVEVGEQMNKALKQRIQEAGVGYVDIDSKDLTTRYANDVIASCAFGLKVDSITEENN 209
             FI          +++  +E G    + D  +  +    D++   A G  V   T ++N
Sbjct: 151 KSFIDLFNANARSVVEKMRKENGK---EFDCHNYMSELTVDILLETAMG--VSKPTRDHN 205

Query: 210 QF-YAMG--KAASTFNFRQLLIF------FGLASVPK----LVKILR------ITLFQKE 250
            F YAM   K     + R   I+      F L    K    L++I+       I L ++E
Sbjct: 206 AFEYAMAVMKMCDILHLRHTKIWLRPDWLFNLTKYGKNQIKLLEIIHGLTKKVIQLKKEE 265

Query: 251 IKTFFRELILGTMKNREAQ--NIIRPDMIHLLMEAKKGKLRHDEKSTKDSDAGFATVEES 308
            K+  R +I  + +  E++  NI+   +        K  L  D+   +     F  +   
Sbjct: 266 YKSGKRNIIDNSAQKTESKTNNIVVEGVSFGQSVGLKDDLDIDDDVGEKKRQAFLDLLIE 325

Query: 309 SVGKKDINRVWTDDDLVAQAVLFFVAGFETVSSAMTFLLHELALNPEVQEKLVEEIRENE 368
           + G+  +  + TD ++  Q       G +T +S  +F L  +  +P++QEK+++E+ E  
Sbjct: 326 A-GQNGV--LLTDKEVKEQVDTIMFEGHDTTASGSSFFLAVMGCHPDIQEKVIQELDEIF 382

Query: 369 KNNNGKFDYNSIQNMVYLDMVVSEVLRLWPPVIALDRMCVKDYNLGKPNDKSKEDFIIRK 428
            +++    +     M YL+  + E LR++PPV  + R    D  L      +  D+ I  
Sbjct: 383 GDSDRPATFQDTLEMKYLERCLLETLRMYPPVPLIAREIKTDLKL------ASGDYTIPA 436

Query: 429 DVAVGIPVWGLHRDPEFFPNPLKFDPERFSEENKHNIKPFSYMPFGLGPRNCIGSRFALC 488
              V I  + LHR P  +PNP  FDP+ F  E   N   ++++PF  GPR+C+G ++A+ 
Sbjct: 437 GCTVVIGTFKLHRQPHIYPNPDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVGRKYAML 496

Query: 489 EVKVMTYQLLQHMEI 503
           ++K++   +L++  +
Sbjct: 497 KLKIVLSTILRNFRV 511


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 58.0 bits (134), Expect = 2e-10
 Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 10/181 (5%)

Query: 323 DLVAQAVLFFVAGFETVSSAMTFLLHELALNPEVQEKLVEEIRENEKNNNGKFDYNSIQN 382
           D  A  V F  AG  T+ + + FL   +  NP VQ KL EE              ++++ 
Sbjct: 319 DKKAAIVDFIAAGIHTLGNTLVFLFDLIGRNPTVQNKLYEETYALAPAGCD-LTIDNLRK 377

Query: 383 MVYLDMVVSEVLRLWPPVIALDRMCVKDYNLGKPNDKSKEDFIIRKDVAVGIPVWGLHRD 442
             YL   ++E LRL P    + R+      L +P + S   + +     V +  W    +
Sbjct: 378 AKYLRACITESLRLIPTTTCIARI------LDEPIELS--GYRLTAGTVVLLHTWIAGLN 429

Query: 443 PEFFPNPLKFDPERFSEENKHNIKPFSYMPFGLGPRNCIGSRFALCEVKVMTYQLLQHME 502
            E F +  K+ PER++     +  P    PFG G R C G RF    ++++  ++++  E
Sbjct: 430 EENFKDAKKYLPERWTTPTTPH-SPLLVAPFGAGRRICPGKRFVDLALQLILAKIIREFE 488

Query: 503 I 503
           I
Sbjct: 489 I 489


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 367 NEKNNNGKFDYNSIQNMVYLDMVVSEVLRLWPPV 400
           N  NNN K++YN+    +Y    +  + ++  PV
Sbjct: 323 NYNNNNYKYNYNNYNKKLYYKNYIINIEQIPVPV 356


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 375 FDYNSIQNMVYLDMVVSEVLRLWPPVIALDRMCVKDYNLGKPNDKSKEDFI 425
           F+  S+   ++ +  +S +LRL P  IAL    V   N  + + +  EDF+
Sbjct: 19  FEEPSVMLKIWTEEFLSTILRLDPKFIALHCQEVGGKNY-EHSTRQVEDFV 68


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 349 ELALNPEVQEKLVEEIRENEKNNNGKFDYNSIQNMVYLDMVVSEVLRLWPPV 400
           E +  P++   L  +   N  NNN K++YN+    +Y ++   E + +  PV
Sbjct: 74  ERSREPKIISSLSNKTIHN--NNNYKYNYNNNCKKLYYNINYIEQIPIPVPV 123


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 12/53 (22%), Positives = 24/53 (45%)

Query: 145 KMKLMMPFIVEVGEQMNKALKQRIQEAGVGYVDIDSKDLTTRYANDVIASCAF 197
           K K+   F++ + +    A  +  ++     V +D K  T R+ + +I   AF
Sbjct: 350 KSKIGQVFLITILDSKVSARIEMNEDDNTSLVSLDKKQYTWRHTSVLIGWSAF 402


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)

Query: 356 VQEKLVEEIRENEKNN 371
           V+EK++EE R+N+  N
Sbjct: 459 VREKIIEEKRKNKNKN 474


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.140    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,183
Number of Sequences: 429
Number of extensions: 7186
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 12
length of query: 536
length of database: 140,377
effective HSP length: 61
effective length of query: 475
effective length of database: 114,208
effective search space: 54248800
effective search space used: 54248800
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 46 (22.6 bits)