GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003933-TA|BGIBMGA003933-PA|IPR008580|Protein of unknown
function DUF862, eukaryotic
         (299 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    25   1.1  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   7.6  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 49  ITSCTPGTTQLGPPHRVQRLG 69
           + +CT G  +LG P R+ + G
Sbjct: 531 VINCTTGKDELGKPSRISKQG 551


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 223 EEIDSVQICEHDDGQVARGEGF 244
           E++DSV+ C      VA G GF
Sbjct: 194 EDVDSVECCGALKNIVACGAGF 215


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.135    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,247
Number of Sequences: 429
Number of extensions: 3319
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 2
length of query: 299
length of database: 140,377
effective HSP length: 57
effective length of query: 242
effective length of database: 115,924
effective search space: 28053608
effective search space used: 28053608
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)