GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003930-TA|BGIBMGA003930-PA|IPR002048|Calcium-binding
EF-hand
         (192 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              26   0.20 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    25   0.47 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    24   0.82 
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   1.9  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   2.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   2.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   2.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.8  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   7.6  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 11/18 (61%), Positives = 14/18 (77%)

Query: 169 MWSVADKNGDGKLNLDEF 186
           M S  D +GDGKLN++EF
Sbjct: 279 MISYDDTDGDGKLNVNEF 296


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 13  NNLYFSSAAAHGHSVDNLERESDGSYRSRDHEHYG 47
           NNLY+S   +HG    + E+ S+  Y   + ++ G
Sbjct: 266 NNLYYSPLLSHGLYYVDTEQFSNPQYEENNVQYEG 300


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 13  NNLYFSSAAAHGHSVDNLERESDGSYRSRDHEHYG 47
           NNLY+S   +H     N+E      Y   + E+ G
Sbjct: 264 NNLYYSPLTSHSLYYVNMEPFMKSQYEENNIEYEG 298


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)

Query: 13  NNLYFSSAAAHG 24
           NNLY+S  A+HG
Sbjct: 261 NNLYYSPLASHG 272


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 13  NNLYFSSAAAHGHSVDNLERESDGSYRSRDHEHYG 47
           NNLY+S  A+      N E+     Y+  D  + G
Sbjct: 263 NNLYYSPVASTSLYYVNTEQFRTSDYQQNDIHYEG 297


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 13  NNLYFSSAAAHGHSVDNLERESDGSYRSRDHEHYG 47
           NNLY+S  A+      N E+     Y+  D  + G
Sbjct: 263 NNLYYSPVASTSLYYVNTEQFRTSDYQQNDIHYEG 297


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 13  NNLYFSSAAAHGHSVDNLERESDGSYRSRDHEHYG 47
           NNLY+S  A+      N E+     Y+  D  + G
Sbjct: 263 NNLYYSPVASTSLYYVNTEQFRTSDYQQNDIHYEG 297


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 14/51 (27%), Positives = 21/51 (41%)

Query: 33   ESDGSYRSRDHEHYGDSGHNTEFDHEAILGSVKESEEFDRLSPEEAKRRLA 83
            ++ G    +  E Y  S  +    HE I G    + E    S E A+ R+A
Sbjct: 1090 QTHGEMTDKQVEAYMLSLRDENRYHEDIFGITLRTAEVHNRSRETARNRMA 1140


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 13  NNLYFSSAAAHGHSVDNLERESDGSYRS 40
           + + + SA  H    DN++ E  G+Y++
Sbjct: 260 HTIIYLSAKGHRPIDDNIDDEFKGTYKT 287


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.134    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,074
Number of Sequences: 429
Number of extensions: 2257
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 192
length of database: 140,377
effective HSP length: 54
effective length of query: 138
effective length of database: 117,211
effective search space: 16175118
effective search space used: 16175118
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 42 (21.0 bits)