GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003906-TA|BGIBMGA003906-PA|IPR009003|Peptidase,
trypsin-like serine and cysteine
         (389 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    24   1.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   7.8  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 28  NGTTYQVPEPYESPDYRYEEPPFVAHSHTFYKEEE 62
           +   Y +P+PY +  +RY   P +   H    E E
Sbjct: 232 DANVYILPDPYNTKFFRYRITPELYSEHLVVPEIE 266


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/25 (36%), Positives = 11/25 (44%)

Query: 365 PWFYLPWTYDFGVELYRSYVLPYYK 389
           PWF   W + F      + V PY K
Sbjct: 424 PWFVEFWEHHFQCRYPNASVTPYNK 448


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.140    0.486 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,779
Number of Sequences: 429
Number of extensions: 7968
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 2
length of query: 389
length of database: 140,377
effective HSP length: 59
effective length of query: 330
effective length of database: 115,066
effective search space: 37971780
effective search space used: 37971780
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)