GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003903-TA|BGIBMGA003903-PA|undefined
         (206 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    27   0.096
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    27   0.096
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    27   0.096
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   2.1  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 27.5 bits (58), Expect = 0.096
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 47  NKFYDNLENLISQSTSFSDGTRIFNLDETSTTTVQKP 83
           +KFYD L+N     +S+  G   FNL +T    ++ P
Sbjct: 93  DKFYDCLKNSADTISSYFVGKMYFNLIDTKCYKLEHP 129


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 27.5 bits (58), Expect = 0.096
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 47  NKFYDNLENLISQSTSFSDGTRIFNLDETSTTTVQKP 83
           +KFYD L+N     +S+  G   FNL +T    ++ P
Sbjct: 98  DKFYDCLKNSADTISSYFVGKMYFNLIDTKCYKLEHP 134


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 27.5 bits (58), Expect = 0.096
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 47  NKFYDNLENLISQSTSFSDGTRIFNLDETSTTTVQKP 83
           +KFYD L+N     +S+  G   FNL +T    ++ P
Sbjct: 98  DKFYDCLKNSADTISSYFVGKMYFNLIDTKCYKLEHP 134


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 31  EPCSLGRATAFNLSNVNKFY 50
           + C  GRATA  +  V++F+
Sbjct: 347 DTCCQGRATAIYIDKVSRFF 366


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.129    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,744
Number of Sequences: 429
Number of extensions: 1992
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 206
length of database: 140,377
effective HSP length: 55
effective length of query: 151
effective length of database: 116,782
effective search space: 17634082
effective search space used: 17634082
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)