Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003809-TA|BGIBMGA003809-PA|IPR000073|Alpha/beta
hydrolase fold-1
(267 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces pomb... 42 7e-05
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 34 0.019
SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|c... 29 0.92
SPAC6G10.03c |||abhydrolase family protein, unknown biological r... 28 1.6
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 27 2.1
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 27 2.1
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 26 4.9
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 26 6.5
SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyce... 26 6.5
SPBC19C7.12c |||alpha-1,2-mannosyltransferase|Schizosaccharomyce... 25 8.6
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 25 8.6
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 25 8.6
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 25 8.6
>SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 42.3 bits (95), Expect = 7e-05
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 44 RIVKFMKWDRFVYMAHSMGVVIGLFYNYVYPNKVSRMIHLDPGPPISMYYYVHHKLPFWF 103
+ +K K D+ + HSMG + +P+KV +++ +D P Y + +F
Sbjct: 79 QFMKDHKLDKASIIGHSMGAKTAMVTALKWPDKVEKLVVVDNSP---WYQDLPRDYGAYF 135
Query: 104 NYIYTEYYDSFKRWNSSEKRRYTYDDALSLVVRNRNLSEEQAEVILARSLDPVAGDKFEL 163
+ + +++ ++K T + ++VR+ LS L + + KF +
Sbjct: 136 RKMIQIDEANITKYSEADKMMSTVEK--DILVRSFLLSN------LKKDSNNSNTFKFRV 187
Query: 164 SWQPSMKKISNVSVSDETLYTSLTANSPPTLVIAASESSMVGPAKSFALNILEKCQNILP 223
+ K + + +L L +S PTLVI A ++ + + AL + +K P
Sbjct: 188 PIELISKSLKTIEGFPASL-NDLVYDS-PTLVIRALKAPFIPDS---ALPVFKK---FFP 239
Query: 224 NFYVVTISGGHDVHITMPEVVAEYIVKFLN 253
+ +V++ GH VH P+ +E I+ FLN
Sbjct: 240 KYELVSLDCGHWVHFEKPKEFSESIINFLN 269
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 34.3 bits (75), Expect = 0.019
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 166 QPSMKKISNVSVSDETLYTSLTANSPPTLVIAASESSMVGPAKSFALN 213
Q S+ + S D+ L TS T N P T + A+E + PAK + ++
Sbjct: 1052 QDSLNSVDQSSGKDKLLLTSSTPNKPTTFFMPANEEILGSPAKDYDIH 1099
>SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 28.7 bits (61), Expect = 0.92
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 140 LSEEQAEVILARSLDPVAGDKFELSWQPSM 169
LS+E + +LDP+ GD + + W+P M
Sbjct: 460 LSKEDDVRLSFATLDPIVGDIYSVFWEPEM 489
>SPAC6G10.03c |||abhydrolase family protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 428
Score = 27.9 bits (59), Expect = 1.6
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 52 DRFVYMAHSMGVVIGLFYNYVYPNKVSRMIHLDP 85
++ + + HSMG + Y YP +V +++ + P
Sbjct: 172 EKMILVGHSMGGYLSAVYAMQYPERVEKLLLVSP 205
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 67 LFYNYVYPNKVSRMIHLDPGPPISMY 92
L ++YV+P S L GPP S+Y
Sbjct: 321 LTHSYVHPGPQSHKYSLSSGPPASLY 346
>SPAC110.02 |pds5||cohesin-associated protein
Pds5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1205
Score = 27.5 bits (58), Expect = 2.1
Identities = 22/125 (17%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Query: 141 SEEQAEVILARSLDPVAGDKFELSWQPSMKKISNVSVSDETLYTSLTANSPPTLVIAASE 200
++E+ V ++++ + + F++ + K+ + D L L A + + +
Sbjct: 368 TDEKVRVATLKTIEQLTFETFKMQFSVQALKLMGDRLRDRKLNVRLQAIRTLSQIYNRAY 427
Query: 201 SSMVGPAKSFALNILEKC-QNILPNFYVVTISGGHDVHITMPEVVAEYIVKFLNYKRNKL 259
++ + +++ + ++L FYV + V I M E+V +Y+ + N+L
Sbjct: 428 QDLIDGVE-YSIQMFSWIPSSLLEVFYVNDETTNAAVEICMAELVLQYLSSDTQTRLNRL 486
Query: 260 WSMIK 264
+ IK
Sbjct: 487 FLSIK 491
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 72 VYPNKVSRMIHLDPGPPISMYYYVHHK 98
V P +S LDP IS Y HHK
Sbjct: 447 VVPRTISENAGLDPTDVISKLYAAHHK 473
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.8 bits (54), Expect = 6.5
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 208 KSFALNI-LEKCQNILPNFYVVTISGGHDVHITMPEVVAEYIVKFLNYKRNKLWSMIKS 265
K F+ N+ +E IL + G ++ +T+P +A V+ N K+ W ++++
Sbjct: 215 KCFSKNLSIEDASEILSKVKEICPEGVYEGQLTLPGFLAYNRVQVENGKQESTWGILRA 273
>SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 6.5
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 142 EEQAEVILARSLDPVAGDKFELSWQPSMKKISNVSVSDETL--YTSLTANSPPTLVIAAS 199
EE + + R++ P+ L+ +K V ++ + L Y SL +
Sbjct: 26 EESTDAPIQRTVQPIVTGSSVLA----LKFADGVMIAADNLASYGSLARFYDVERLTKVG 81
Query: 200 ESSMVGPAKSFALNILEKCQNILPNFYVVTISGGHDVHITMPEVVAEYIVKFLNYKRNKL 259
++++VG ++ ++ Q +L + + G D + P + EY+ K L +RNKL
Sbjct: 82 DNTIVGAGGD--ISDYQQIQRLLEKLEIKEGNYG-DGYALQPSYIHEYLSKVLYARRNKL 138
>SPBC19C7.12c |||alpha-1,2-mannosyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 70 NYVYPNKVSRMIHLDPGPPIS-MYYYVHH---KLPFWFNYIYTEYYD 112
N ++PN I D G + +++ + K+ FW + +Y++Y+D
Sbjct: 250 NALHPNNALNFISNDDGETYNGCHFWTNFEIAKVDFWESEVYSKYFD 296
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.4 bits (53), Expect = 8.6
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 62 GVVIGLFYNYVYPNKVSRMIHLDPGPPISMYYYVHHKLPFWFNY 105
G V G V PN V L PG + YY V+H+ P+ N+
Sbjct: 393 GQVYGQPQYIVDPNMVQYGPILQPGY-VPQYYPVYHQTPYTQNF 435
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 25.4 bits (53), Expect = 8.6
Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 137 NRNLSEEQAEVILARSLDPVAGDKFELSWQPSMKKISNVSVSDETLYTSLTANSPPTLVI 196
N N + + +I ++L+P + + + + ++ + S +S SDE S+ +N TL
Sbjct: 453 NSNDTAPSSHIIADKNLEPTSNIQLKKNPDGNLVETSELSDSDE---NSVLSNKSSTLSK 509
Query: 197 AASESSMV-----GPAKSFALNILEKCQNILPNFYVVTISGGHDVHITMPEVVAEY 247
E++ +KSF + + Q + + GG T+ E +Y
Sbjct: 510 KVVENTSPLKYTHSASKSFIGEVQDSLQALKTKAHKPRSIGGDSSQTTLSETTKKY 565
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 25.4 bits (53), Expect = 8.6
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 162 ELSWQPSMKKISNVSV-SDETLYTSLTANSPPTLVIAASESSMV 204
++S Q S I N++ SD +L T L + SP T + ASE S++
Sbjct: 313 KVSTQRSSSPIENLATKSDASLVTGLQS-SPYTHIAPASEMSLI 355
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.134 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,320,280
Number of Sequences: 5004
Number of extensions: 56689
Number of successful extensions: 168
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 161
Number of HSP's gapped (non-prelim): 14
length of query: 267
length of database: 2,362,478
effective HSP length: 72
effective length of query: 195
effective length of database: 2,002,190
effective search space: 390427050
effective search space used: 390427050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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