GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003802-TA|BGIBMGA003802-PA|IPR000719|Protein kinase,
IPR008266|Tyrosine protein kinase, active site, IPR001245|Tyrosine
protein kinase, IPR011009|Protein kinase-like
         (892 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.   131   3e-32
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    66   9e-13
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    40   7e-05
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    40   1e-04
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    40   1e-04
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                36   0.001
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    36   0.001

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score =  131 bits (316), Expect = 3e-32
 Identities = 93/314 (29%), Positives = 147/314 (46%), Gaps = 32/314 (10%)

Query: 576 VDPAHLVTYDILGTGRFGRVHLGVLQVP--GKAPRPVAVKSLRKGAAPAEETEFLNEAVI 633
           +D  ++    I+G G FG V  G L++P  G+    VA+K+L+ G+A     +FL EA I
Sbjct: 628 IDAGYITIEAIIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSADKARNDFLTEASI 687

Query: 634 MAALDHEHIIRFVGACVAKGPPLVLMEHAFFGDLRRYLRERRHFAEQSDHLSQDSKDFEE 693
           M   +H ++I   G      P +++ E    G L  +LR            + D K F+ 
Sbjct: 688 MGQFEHPNVIFLQGVVTKSNPVMIITEFMENGSLDTFLR------------ANDGK-FQV 734

Query: 694 SEHVSXXXXXXXXXXXXXXXXXXXRRGVVHRDVRASNCLVDSRRRLKLGDFGMARKTDAT 753
            + V                        VHRD+ A N LV++    K+ DFG++R+ ++ 
Sbjct: 735 LQLVGMLRGIASGMQYLA------EMNYVHRDLAARNVLVNAALVCKIADFGLSREIESA 788

Query: 754 GADGAAEYACRRRGLFPVLWMAPESLSRGAFSSASDVWSLGVLMLETVTLGDRPYGSWSP 813
             +GA  Y  R  G  PV W APE+++   F+SASDVWS+G++  E ++ G+RPY +WS 
Sbjct: 789 -TEGA--YTTRG-GKIPVRWTAPEAIAFRKFTSASDVWSMGIVCWEVMSYGERPYWNWSN 844

Query: 814 LRVLQHVSSGGRPELPFGXXXXXXXXXXXCWRRAACERPAAGEVARYLRD---HPRALRP 870
             V++ +  G R   P             CW++    RP    + + L      P  LR 
Sbjct: 845 QDVIKSIEKGYRLPAPMDCPEAIYQLMLDCWQKERTHRPTFANLTQTLDKLIRSPDTLRK 904

Query: 871 VLRSR----VAPDA 880
           + ++R    +APDA
Sbjct: 905 IAQNRGTNPLAPDA 918


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 66.5 bits (155), Expect = 9e-13
 Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 39/266 (14%)

Query: 562 AKLPPVTQELTRF-LVDPAHLVTYDILGTGRFGRVHLGVLQVPGKAPRPVAVKSLRKG-- 618
           A +P + +E     L D   L T   LG G FGRV L  +Q+ G + R  A+K ++K   
Sbjct: 350 ATIPELNEEFRDLRLQDLRPLAT---LGVGGFGRVEL--VQIAGDSSRSFALKQMKKAQI 404

Query: 619 AAPAEETEFLNEAVIMAALDHEHIIRFVGACVAKGPPLVLMEHAFFGDLRRYLRERRHFA 678
               ++   ++E  IM   D + +++       +    +LME    G+L   LR++ HF 
Sbjct: 405 VETRQQQHIMSEKRIMGEADCDFVVKLFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFD 464

Query: 679 EQSDHLSQDSKDFEESEHVSXXXXXXXXXXXXXXXXXXXRRGVVHRDVRASNCLVDSRRR 738
           + +      +   E  +++                     R +++RD++  N L+DS+  
Sbjct: 465 DGTTRF-YTACVVEAFDYLHS-------------------RNIIYRDLKPENLLLDSQGY 504

Query: 739 LKLGDFGMARKTDATGADGAAEYA-CRRRGLFPVLWMAPESLSRGAFSSASDVWSLGVLM 797
           +KL DFG A++ D     G   +  C         ++APE +       ++D WSLGVLM
Sbjct: 505 VKLVDFGFAKRLD----HGRKTWTFCGTPE-----YVAPEVILNKGHDISADYWSLGVLM 555

Query: 798 LETVTLGDRPYGSWSPLRVLQHVSSG 823
            E +T G  P+    P++    +  G
Sbjct: 556 FELLT-GTPPFTGGDPMKTYNIILKG 580


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 40.3 bits (90), Expect = 7e-05
 Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 11/107 (10%)

Query: 720 GVVHRDVRASNCLVDSRRR---LKLGDFGMARKTDATGADGAAEYACRRRGLFPVLWMAP 776
           GVVHRD++  N L+ S+ +   +KL DFG+A +       G A+      G  P  +++P
Sbjct: 29  GVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-----GEAQAWFGFAGT-PG-YLSP 81

Query: 777 ESLSRGAFSSASDVWSLGVLMLETVTLGDRPYGSWSPLRVLQHVSSG 823
           E L +  +    D+W+ GV+ L  + +G  P+      R+   + +G
Sbjct: 82  EVLKKEPYGKPVDIWACGVI-LYILLVGYPPFWDEDQHRLYAQIKTG 127


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 39.5 bits (88), Expect = 1e-04
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 11/78 (14%)

Query: 719 RGVVHRDVRASNCLVDSRRRLKLGDFGMARKTDATGADGAAEYACRRRGLFPVLWMAPES 778
           +G+VHRDV+  N L+D   R KL DFG              E       +   + MAPE 
Sbjct: 716 QGLVHRDVKLKNVLLDIENRAKLTDFGFC----------ITEVMMLGSIVGTPVHMAPEL 765

Query: 779 LSRGAFSSASDVWSLGVL 796
           LS G + S+ DV++ G+L
Sbjct: 766 LS-GHYDSSVDVYAFGIL 782


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 39.5 bits (88), Expect = 1e-04
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 11/78 (14%)

Query: 719 RGVVHRDVRASNCLVDSRRRLKLGDFGMARKTDATGADGAAEYACRRRGLFPVLWMAPES 778
           +G+VHRDV+  N L+D   R KL DFG              E       +   + MAPE 
Sbjct: 754 QGLVHRDVKLKNVLLDIENRAKLTDFGFC----------ITEVMMLGSIVGTPVHMAPEL 803

Query: 779 LSRGAFSSASDVWSLGVL 796
           LS G + S+ DV++ G+L
Sbjct: 804 LS-GHYDSSVDVYAFGIL 820


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 36.3 bits (80), Expect = 0.001
 Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 12/141 (8%)

Query: 720 GVVHRDVRASNCLVDSRRRLKLGDFGMARKTDATGADGAAEYACRRRGLFPVLWMAPESL 779
           G+VH DV+  N L+    + KL DFG    +   GA    +      G     + APE +
Sbjct: 175 GIVHADVKPKNILMSKNGQPKLTDFG---SSVLIGAPNEIDKFYGTPG-----YTAPEVI 226

Query: 780 SRGAFSSASDVWSLGVLMLETVTLGDRPYGSWSPLRVLQHVSSGGRP---ELPFGXXXXX 836
            +   + A+D++SLG++  + +     P+       ++   + G RP    +        
Sbjct: 227 KQNRPTPAADIYSLGIVAWQ-MLFRKLPFAGLHSHTIIYLSAKGHRPIDDNIDDEFKGTY 285

Query: 837 XXXXXXCWRRAACERPAAGEV 857
                  W +   ERP   EV
Sbjct: 286 KTLYKQMWSQNITERPTTNEV 306


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 36.3 bits (80), Expect = 0.001
 Identities = 13/31 (41%), Positives = 22/31 (70%)

Query: 719 RGVVHRDVRASNCLVDSRRRLKLGDFGMARK 749
           RG+V+RD++  N L+D    +K+ DFGM ++
Sbjct: 104 RGIVYRDLKLDNVLLDQDGHIKIADFGMCKE 134


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.137    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,103
Number of Sequences: 429
Number of extensions: 9653
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 10
length of query: 892
length of database: 140,377
effective HSP length: 64
effective length of query: 828
effective length of database: 112,921
effective search space: 93498588
effective search space used: 93498588
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 48 (23.4 bits)