Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003779-TA|BGIBMGA003779-PA|undefined
(297 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 25 0.81
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 23 4.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 7.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 7.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 7.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 7.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 7.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 7.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 7.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 7.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 7.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 7.5
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 7.5
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 21 9.9
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 21 9.9
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.9
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 25.0 bits (52), Expect = 0.81
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 35 LSCRQLPYWKTLTKRMSDSYQSLVSLLTKNKKK-RFSRRLNSKYVRNEVIVYNV 87
+SC P + + + + SL S LTKN K+ FS+ K +++ I+ NV
Sbjct: 658 ISCHTTP--DSFIEAPNKTLPSLPSTLTKNSKQGLFSKLFAKKVKKDKDIILNV 709
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 230 NKESAFYKSPKGRIILSTQTDND 252
++E + + P G+I+ QTD D
Sbjct: 95 DEEKRYQEHPNGKILRELQTDYD 117
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.5
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 48 KRMSDSYQSLVSLLTKNKKKRFSRRLNSKYVRNEVIV---YNVNNSTEKEQESNLVNDWY 104
KR Y+ ++N+ +R R K + N + YN NN+ + N +Y
Sbjct: 53 KREYRKYRETSKERSRNRTER-ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYY 111
Query: 105 KREYTNQVGEP 115
Y Q+ P
Sbjct: 112 NINYIEQIPIP 122
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.5
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 48 KRMSDSYQSLVSLLTKNKKKRFSRRLNSKYVRNEVIV---YNVNNSTEKEQESNLVNDWY 104
KR Y+ ++N+ +R R K + N + YN NN+ + N +Y
Sbjct: 53 KREYRKYRETSKERSRNRTER-ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYY 111
Query: 105 KREYTNQVGEP 115
Y Q+ P
Sbjct: 112 NINYIEQIPIP 122
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.5
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 48 KRMSDSYQSLVSLLTKNKKKRFSRRLNSKYVRNEVIV---YNVNNSTEKEQESNLVNDWY 104
KR Y+ ++N+ +R R K + N + YN NN+ + N +Y
Sbjct: 53 KREYRKYRETSKERSRNRTER-ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYY 111
Query: 105 KREYTNQVGEP 115
Y Q+ P
Sbjct: 112 NINYIEQIPIP 122
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.5
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 48 KRMSDSYQSLVSLLTKNKKKRFSRRLNSKYVRNEVIV---YNVNNSTEKEQESNLVNDWY 104
KR Y+ ++N+ +R R K + N + YN NN+ + N +Y
Sbjct: 53 KREYRKYRETSKERSRNRTER-ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYY 111
Query: 105 KREYTNQVGEP 115
Y Q+ P
Sbjct: 112 NINYIEQIPIP 122
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.5
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 48 KRMSDSYQSLVSLLTKNKKKRFSRRLNSKYVRNEVIV---YNVNNSTEKEQESNLVNDWY 104
KR Y+ ++N+ +R R K + N + YN NN+ + N +Y
Sbjct: 53 KREYRKYRETSKERSRNRTER-ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYY 111
Query: 105 KREYTNQVGEP 115
Y Q+ P
Sbjct: 112 NINYIEQIPIP 122
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.5
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 48 KRMSDSYQSLVSLLTKNKKKRFSRRLNSKYVRNEVIV---YNVNNSTEKEQESNLVNDWY 104
KR Y+ ++N+ +R R K + N + YN NN+ + N +Y
Sbjct: 53 KREYRKYRETSKERSRNRTER-ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYY 111
Query: 105 KREYTNQVGEP 115
Y Q+ P
Sbjct: 112 NINYIEQIPIP 122
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.5
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 48 KRMSDSYQSLVSLLTKNKKKRFSRRLNSKYVRNEVIV---YNVNNSTEKEQESNLVNDWY 104
KR Y+ ++N+ +R R K + N + YN NN+ + N +Y
Sbjct: 53 KREYRKYRETSKERSRNRTER-ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYY 111
Query: 105 KREYTNQVGEP 115
Y Q+ P
Sbjct: 112 NINYIEQIPIP 122
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.5
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 48 KRMSDSYQSLVSLLTKNKKKRFSRRLNSKYVRNEVIV---YNVNNSTEKEQESNLVNDWY 104
KR Y+ ++N+ +R R K + N + YN NN+ + N +Y
Sbjct: 53 KREYRKYRETSKERSRNRTER-ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYY 111
Query: 105 KREYTNQVGEP 115
Y Q+ P
Sbjct: 112 NINYIEQIPIP 122
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.5
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 48 KRMSDSYQSLVSLLTKNKKKRFSRRLNSKYVRNEVIV---YNVNNSTEKEQESNLVNDWY 104
KR Y+ ++N+ +R R K + N + YN NN+ + N +Y
Sbjct: 286 KREYRKYRETSKERSRNRTER-ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYY 344
Query: 105 KREYTNQVGEP 115
Y Q+ P
Sbjct: 345 NINYIEQIPIP 355
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.5
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 48 KRMSDSYQSLVSLLTKNKKKRFSRRLNSKYVRNEVIV---YNVNNSTEKEQESNLVNDWY 104
KR Y+ ++N+ +R R K + N + YN NN+ + N +Y
Sbjct: 286 KREYRKYRETSKERSRNRTER-ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYY 344
Query: 105 KREYTNQVGEP 115
Y Q+ P
Sbjct: 345 NINYIEQIPIP 355
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 7.5
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 48 KRMSDSYQSLVSLLTKNKKKRFSRRLNSKYVRNEVIVYNVNNSTEKEQESNLVNDWYKRE 107
K+ Y+ L + K ++R SR+ S+ E Y NS K +E++ +RE
Sbjct: 246 KKKDRRYEKLHNEKKKLLEERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRRE 305
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 265 HVLYASVENTFMSDMDGKKLQISFYN 290
H+L+ S + FM D ++ I+F++
Sbjct: 102 HILWTSYKKVFMKDNILRQYFITFFS 127
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 265 HVLYASVENTFMSDMDGKKLQISFYN 290
H+L+ S + FM D ++ I+F++
Sbjct: 85 HILWTSYKKVFMKDNILRQYFITFFS 110
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.9
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 48 KRMSDSYQSLVSLLTKNKKKRFSRRLNSKYVRNEVIV---YNVNNSTEKEQESNLVNDWY 104
KR Y+ ++N+ +R R K + N + YN NN+ + N +Y
Sbjct: 53 KREYRKYRETSKERSRNRTER-ERSKEPKIISNNNPLSNNYNYNNNYNNYNKHNYNKLYY 111
Query: 105 KREYTNQVGEP 115
Y Q+ P
Sbjct: 112 NINYIEQIPIP 122
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.318 0.133 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,300
Number of Sequences: 429
Number of extensions: 4712
Number of successful extensions: 22
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 16
length of query: 297
length of database: 140,377
effective HSP length: 57
effective length of query: 240
effective length of database: 115,924
effective search space: 27821760
effective search space used: 27821760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)
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