GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003771-TA|BGIBMGA003771-
PA|IPR003386|Lecithin:cholesterol acyltransferase
         (399 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    23   6.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   8.0  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   8.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   8.0  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   8.0  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 356 RKRRGRTTLNGGKPVKSLPLSNAEHLKILHDK 387
           R+ RG   + G K  KS P  + ++ + ++DK
Sbjct: 36  RQERGSIVIQGTKEGKSRPSLDIDYKQRVYDK 67


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 197 QYIRRMISLSTPWAGSMKAVKVFAIGDDLGSRMLFESTMRTQQITCPSLAWLLPSP 252
           +YI+R+ ++      ++KA   FA  + +GS +LF    +   I     A  LP P
Sbjct: 456 KYIQRLKAIRA----TLKASPFFASHEVVGSSLLFVHDTKNAGIWMIDFAKTLPLP 507


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 197 QYIRRMISLSTPWAGSMKAVKVFAIGDDLGSRMLFESTMRTQQITCPSLAWLLPSP 252
           +YI+R+ ++      ++KA   FA  + +GS +LF    +   I     A  LP P
Sbjct: 371 KYIQRLKAIRA----TLKASPFFASHEVVGSSLLFVHDTKNAGIWMIDFAKTLPLP 422


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 197 QYIRRMISLSTPWAGSMKAVKVFAIGDDLGSRMLFESTMRTQQITCPSLAWLLPSP 252
           +YI+R+ ++      ++KA   FA  + +GS +LF    +   I     A  LP P
Sbjct: 690 KYIQRLKAIRA----TLKASPFFASHEVVGSSLLFVHDTKNAGIWMIDFAKTLPLP 741


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 146 NENQEFFIKFKSLVEDTYNKNNKTSVTLIVHSMGGRMALHFLQLQTQKW 194
           + +Q F + F SL ED Y   N+T+V   +++  G ++   L   T  W
Sbjct: 360 HNHQSFGMDF-SLNEDFYPTFNQTNVDQYLYNQTGPLSSTGLAQVTGIW 407


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.135    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,374
Number of Sequences: 429
Number of extensions: 5393
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 5
length of query: 399
length of database: 140,377
effective HSP length: 59
effective length of query: 340
effective length of database: 115,066
effective search space: 39122440
effective search space used: 39122440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)