GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003761-TA|BGIBMGA003761-PA|IPR006186|Serine/threonine-
specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase,
IPR004843|Metallophosphoesterase
         (304 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   5.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   5.9  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 143 VFDVLPLAAVVDDKQVFCCHGGI 165
           ++ V  + A +D   VF CH G+
Sbjct: 790 IYKVGNVQAYIDGNVVFVCHNGM 812


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 58  RVLWPSEAGLWPRVLI 73
           RV WP +AG + ++L+
Sbjct: 371 RVAWPDDAGRFAKLLL 386


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 58  RVLWPSEAGLWPRVLI 73
           RV WP +AG + ++L+
Sbjct: 371 RVAWPDDAGRFAKLLL 386


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.139    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,806
Number of Sequences: 429
Number of extensions: 3479
Number of successful extensions: 56
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53
Number of HSP's gapped (non-prelim): 3
length of query: 304
length of database: 140,377
effective HSP length: 57
effective length of query: 247
effective length of database: 115,924
effective search space: 28633228
effective search space used: 28633228
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 44 (21.8 bits)