Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003751-TA|BGIBMGA003751-PA|IPR005121|Ferredoxin-fold
anticodon-binding
(229 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 2.4
AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex det... 22 5.4
AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex det... 22 5.4
AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex det... 22 5.4
AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex det... 22 5.4
AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex det... 22 5.4
AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex det... 22 5.4
AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex det... 22 5.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 5.4
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 9.5
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 205 WRNKRRGSLYKGMGVLCCVSRPNY 228
+R+KRRG +Y MG + V+R Y
Sbjct: 133 YRSKRRGFVYYTMGQIREVARHFY 156
>AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 153 PDFNQEELCSIAKDTQEITRIVNDIQEYLPQHENLNHLETTVALKGDDVNGLWRNKRRGS 212
P F +EE+ +I T EIT + + + EN A+ + + R+ +R S
Sbjct: 169 PIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRTS 228
>AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 153 PDFNQEELCSIAKDTQEITRIVNDIQEYLPQHENLNHLETTVALKGDDVNGLWRNKRRGS 212
P F +EE+ +I T EIT + + + EN A+ + + R+ +R S
Sbjct: 169 PIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRTS 228
>AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 153 PDFNQEELCSIAKDTQEITRIVNDIQEYLPQHENLNHLETTVALKGDDVNGLWRNKRRGS 212
P F +EE+ +I T EIT + + + EN A+ + + R+ +R S
Sbjct: 169 PIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRTS 228
>AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 153 PDFNQEELCSIAKDTQEITRIVNDIQEYLPQHENLNHLETTVALKGDDVNGLWRNKRRGS 212
P F +EE+ +I T EIT + + + EN A+ + + R+ +R S
Sbjct: 169 PIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAISSNSLGSRSRSFQRTS 228
>AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 153 PDFNQEELCSIAKDTQEITRIVNDIQEYLPQHENLNHLETTVALKGDDVNGLWRNKRRGS 212
P F +EE+ +I T EIT + + + EN A+ + + R+ +R S
Sbjct: 169 PIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRTS 228
>AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 153 PDFNQEELCSIAKDTQEITRIVNDIQEYLPQHENLNHLETTVALKGDDVNGLWRNKRRGS 212
P F +EE+ +I T EIT + + + EN A+ + + R+ +R S
Sbjct: 169 PIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRTS 228
>AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 153 PDFNQEELCSIAKDTQEITRIVNDIQEYLPQHENLNHLETTVALKGDDVNGLWRNKRRGS 212
P F +EE+ +I T EIT + + + EN A+ + + R+ +R S
Sbjct: 169 PIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRTS 228
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 153 PDFNQEELCSIAKDTQEITRIVNDIQEYLPQHENLNHLETTVALKGDDVNGLWRNKRRGS 212
P F +EE+ +I T EIT + + + EN A+ + + R+ +R S
Sbjct: 169 PIFEREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRTS 228
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 150 QITPDFNQEELCSIAKDTQEITRIVNDIQEY 180
Q+T N ++CS+ IT + + ++E+
Sbjct: 124 QMTKHHNFIKVCSVNDVNMTITELTDPVKEF 154
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.323 0.137 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,230
Number of Sequences: 429
Number of extensions: 2572
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 229
length of database: 140,377
effective HSP length: 56
effective length of query: 173
effective length of database: 116,353
effective search space: 20129069
effective search space used: 20129069
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 42 (21.0 bits)
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