Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003746-TA|BGIBMGA003746-PA|undefined
(423 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 26 0.69
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.91
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 25 1.2
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 24 2.1
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 24 2.1
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 3.7
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 23 6.4
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 23 6.4
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 25.8 bits (54), Expect = 0.69
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 105 INDLTNDTENLRLISDSCTSPITSKDKDNSCETYMEAKEFS 145
I LT DT+ RL + S + +KD+ + KEFS
Sbjct: 239 IKKLTEDTQERRLSNKGSISKLQFHNKDDDLILTLGKKEFS 279
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.4 bits (53), Expect = 0.91
Identities = 17/68 (25%), Positives = 27/68 (39%)
Query: 166 TLQDNEEPLGSSTASKETLEANKSNENKPTKLLETNFDCNEVCDIEFNSKRNSMSNPDST 225
TL E+ + KE L+ + +LL D + C + + +SN ST
Sbjct: 47 TLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQDADFCCGMRWPGDATGLSNRSST 106
Query: 226 EVNDSREQ 233
ND + Q
Sbjct: 107 SSNDPKNQ 114
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 25.0 bits (52), Expect = 1.2
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Query: 307 EDESIDLQNTPKKSKSS---SNDGSRTPLSCMKNKADTGHT 344
ED ++ PKKS S S+DG PLS +KNK +T H+
Sbjct: 422 EDHDENMIIPPKKSDMSNMQSDDGG--PLS-LKNKVETTHS 459
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 24.2 bits (50), Expect = 2.1
Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 9/152 (5%)
Query: 52 IDLRKTFESTNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFER-TPIIISSKINDLTN 110
+D R S + L+ + P N +S + QD E+ + I S + N
Sbjct: 33 VDRRSPSSSRSPSPSLLTSQPHQD---HNKEKSKNNHHCNQDTEKLNQLEIESDNSKEVN 89
Query: 111 DTENLRLISDSCTSPI---TSKDKDNSCETYMEAKEFSPDLISPKNLCNGFLDSTFNDTL 167
D + I D + + +K+K N C + E K L K L N +DS + L
Sbjct: 90 DKKEENFIVDRLRNDLFECENKEKSNVCLKFEEQKRRKKSLDDVKILRNDRIDS-YKSNL 148
Query: 168 QDNEEPLGSSTASKETLEANKSNENKPTKLLE 199
+ ++ S + LE N + + +LLE
Sbjct: 149 KCDKCSTYQSNGEEVCLE-NCTGYQQYLRLLE 179
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 24.2 bits (50), Expect = 2.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 343 HTRSKSANTVFDPKGSDIKH 362
H R K T F+P+ +D +H
Sbjct: 156 HPRYKRPRTTFEPRATDSRH 175
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 3.7
Identities = 48/201 (23%), Positives = 75/201 (37%), Gaps = 24/201 (11%)
Query: 70 NNPILSAVIKNHLQSYDPR------SPTQDFERTPIIIS-SKINDLTNDTENLRLISDSC 122
N+ +SA++ + SYD R P + T ++S S ++++ D
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 123 TSPITSKDKDNSCETYMEAKEFSPDLISPKNLCNGFLDSTFNDTLQDNE----EPLGSST 178
T P + K ET EF ++ P S F+ NE GS T
Sbjct: 68 TDPRLAFKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSIT 127
Query: 179 AS-KETLEANKSNENKPTKLLETNFDCNEVCDIEFNSKRNSMS------NPDSTEVNDSR 231
S + T+ A+ P L D ++C IE S +M N V S
Sbjct: 128 RSIRLTITASC-----PMNLQYFPMD-RQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSN 181
Query: 232 EQCMPVFKILEYDPRSPSIGI 252
E +P FK+L + R+ I +
Sbjct: 182 EVSLPQFKVLGHRQRAMEISL 202
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.6 bits (46), Expect = 6.4
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 288 VEIGHGLEAQTNSDGLLVYEDESIDLQNTPKKSKSSSNDG 327
V IGH ++ + G L+Y+ ID + K K + G
Sbjct: 11 VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG 50
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 6.4
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 288 VEIGHGLEAQTNSDGLLVYEDESIDLQNTPKKSKSSSNDG 327
V IGH ++ + G L+Y+ ID + K K + G
Sbjct: 11 VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG 50
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.307 0.126 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,512
Number of Sequences: 429
Number of extensions: 6337
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 8
length of query: 423
length of database: 140,377
effective HSP length: 60
effective length of query: 363
effective length of database: 114,637
effective search space: 41613231
effective search space used: 41613231
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 45 (22.2 bits)
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