Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003744-TA|BGIBMGA003744-PA|IPR000038|Cell division/GTP
binding protein
(383 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 26 0.47
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 25 0.82
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 25 0.82
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 2.5
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 24 2.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 3.3
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 3.3
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 3.3
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 3.3
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 3.3
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 3.3
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 3.3
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 5.8
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 7.6
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 7.6
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 7.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 7.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 7.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 7.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 7.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 7.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 7.6
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 7.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 7.6
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 7.6
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 7.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 7.6
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 7.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 7.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 7.6
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.47
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 66 LRVKKTVGVETSVVLLKENGVNLTLTIVDTPGFGDAVDN 104
L+ ++ G+ + L K +TI+D PG D + N
Sbjct: 63 LKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKN 101
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 25.4 bits (53), Expect = 0.82
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 66 LRVKKTVGVETSVVLLKENGVNLTLTIVDTPGFGDAVDN 104
L+ ++ G+ + L K +TI+D PG D + N
Sbjct: 6 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 44
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.82
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 66 LRVKKTVGVETSVVLLKENGVNLTLTIVDTPGFGDAVDN 104
L+ ++ G+ + L K +TI+D PG D + N
Sbjct: 63 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 101
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 2.5
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 228 VPFAVVGANTVIEQDGRRIRGRKYPWGIAEG-VLCPQGLMNSFMTVW 273
+PF TVI+ +G R + Y +GI G + + +SF+ W
Sbjct: 352 LPFIKDIYETVIKLEGASFRSKPYRFGIQNGDYVVLETEWSSFINPW 398
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 23.8 bits (49), Expect = 2.5
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 228 VPFAVVGANTVIEQDGRRIRGRKYPWGIAEG-VLCPQGLMNSFMTVW 273
+PF TVI+ +G R + Y +GI G + + +SF+ W
Sbjct: 58 LPFIKDIYETVIKLEGASFRSKPYRFGIQNGDYVVLETEWSSFINPW 104
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.4 bits (48), Expect = 3.3
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 272 VWNPLAQMEEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
VW L Q E E REH+ M+KM E E+ +I + K+ +R+K + ++
Sbjct: 42 VW--LIQQERE-REHERLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 3.3
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 272 VWNPLAQMEEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
VW L Q E E REH+ M+KM E E+ +I + K+ +R+K + ++
Sbjct: 42 VW--LIQQERE-REHERLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 3.3
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 272 VWNPLAQMEEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
VW L Q E E REH+ M+KM E E+ +I + K+ +R+K + ++
Sbjct: 42 VW--LIQQERE-REHERLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 3.3
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 272 VWNPLAQMEEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
VW L Q E E REH+ M+KM E E+ +I + K+ +R+K + ++
Sbjct: 42 VW--LIQQERE-REHERLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 3.3
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 272 VWNPLAQMEEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
VW L Q E E REH+ M+KM E E+ +I + K+ +R+K + ++
Sbjct: 42 VW--LIQQERE-REHERLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 3.3
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 272 VWNPLAQMEEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
VW L Q E E REH+ M+KM E E+ +I + K+ +R+K + ++
Sbjct: 42 VW--LIQQERE-REHERLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.4 bits (48), Expect = 3.3
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 272 VWNPLAQMEEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
VW L Q E E REH+ M+KM E E+ +I + K+ +R+K + ++
Sbjct: 42 VW--LIQQERE-REHERLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 5.8
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Query: 272 VWNPLAQMEEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAK 311
VW L Q E E REH+ M+KM E E+ +I + K+ +R+K
Sbjct: 42 VW--LIQQERE-REHERLMKKMILEYELRRIREIEKLGSERSK 81
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 7.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 280 EEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
+E +REH M+KM E E+ +I + K+ +R+K + ++
Sbjct: 47 QEREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 7.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 280 EEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
+E +REH M+KM E E+ +I + K+ +R+K + ++
Sbjct: 47 QEREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 7.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 280 EEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
+E +REH M+KM E E+ +I + K+ +R+K + ++
Sbjct: 47 QEREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 7.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 280 EEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
+E +REH M+KM E E+ +I + K+ +R+K + ++
Sbjct: 47 QEREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 7.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 280 EEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
+E +REH M+KM E E+ +I + K+ +R+K + ++
Sbjct: 47 QEREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 7.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 280 EEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
+E +REH M+KM E E+ +I + K+ +R+K + ++
Sbjct: 47 QEREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 7.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 280 EEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
+E +REH M+KM E E+ +I + K+ +R+K + ++
Sbjct: 47 QEREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 7.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 280 EEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
+E +REH M+KM E E+ +I + K+ +R+K + ++
Sbjct: 47 QEREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 7.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 280 EEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
+E +REH M+KM E E+ +I + K+ +R+K + ++
Sbjct: 47 QEREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 7.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 280 EEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
+E +REH M+KM E E+ +I + K+ +R+K + ++
Sbjct: 47 QEREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 7.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 280 EEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
+E +REH M+KM E E+ +I + K+ +R+K + ++
Sbjct: 47 QEREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 7.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 280 EEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
+E +REH M+KM E E+ +I + K+ +R+K + ++
Sbjct: 47 QEREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 7.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 280 EEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
+E +REH M+KM E E+ +I + K+ +R+K + ++
Sbjct: 47 QEREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 7.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 280 EEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
+E +REH M+KM E E+ +I + K+ +R+K + ++
Sbjct: 47 QEREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 7.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 280 EEEKREHDLKMEKM--ESEMEQIFQ-TKVRDKRAKLKESEA 317
+E +REH M+KM E E+ +I + K+ +R+K + ++
Sbjct: 47 QEREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDS 87
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 7.6
Identities = 10/50 (20%), Positives = 25/50 (50%)
Query: 255 IAEGVLCPQGLMNSFMTVWNPLAQMEEEKREHDLKMEKMESEMEQIFQTK 304
+ EG P S +V + Q +++ D++ ++ ES+ +Q+ ++
Sbjct: 1747 MTEGCASPPPAATSMKSVSSRRRQQRKQQTPGDVESDESESDPDQLTSSR 1796
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 7.6
Identities = 10/50 (20%), Positives = 25/50 (50%)
Query: 255 IAEGVLCPQGLMNSFMTVWNPLAQMEEEKREHDLKMEKMESEMEQIFQTK 304
+ EG P S +V + Q +++ D++ ++ ES+ +Q+ ++
Sbjct: 1743 MTEGCASPPPAATSMKSVSSRRRQQRKQQTPGDVESDESESDPDQLTSSR 1792
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.316 0.133 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,133
Number of Sequences: 429
Number of extensions: 4761
Number of successful extensions: 33
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 30
length of query: 383
length of database: 140,377
effective HSP length: 59
effective length of query: 324
effective length of database: 115,066
effective search space: 37281384
effective search space used: 37281384
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)
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