GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003740-TA|BGIBMGA003740-PA|IPR007114|Major facilitator
superfamily, IPR005829|Sugar transporter superfamily, IPR003663|Sugar
transporter, IPR005828|General substrate transporter
         (524 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    25   2.0  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   8.2  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 11/27 (40%), Positives = 19/27 (70%)

Query: 350 VATALIDRAGRKLLLYISSVTMTITLI 376
           + TA+ D  G  LLL++ + T+T+TL+
Sbjct: 116 LVTAIGDAYGVALLLHMLTTTITLTLL 142


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query: 454 QNIVDAISAAGTFWLFG 470
           +N+VD +    T+W FG
Sbjct: 67  KNVVDIVLGGLTYWAFG 83


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.328    0.143    0.447 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,585
Number of Sequences: 429
Number of extensions: 6119
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 2
length of query: 524
length of database: 140,377
effective HSP length: 61
effective length of query: 463
effective length of database: 114,208
effective search space: 52878304
effective search space used: 52878304
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 46 (22.6 bits)