Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003736-TA|BGIBMGA003736-PA|IPR004272|Odorant binding
protein, IPR013053|Hormone binding
(168 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 66 1e-13
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.4
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 66.5 bits (155), Expect = 1e-13
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 4 KNIYVEGLKGSTVHDARVRADEDNFYMEVDLSAPSIVIRGDFKGEGQYNALKVKAYGDFN 63
KNI + GL + D D + + P + D+K EG+ L V+ G N
Sbjct: 91 KNIKLYGLT-KNLEIKNYNIDWDKCILSSESYNPQVDFVADYKIEGKVLLLPVRGAGKSN 149
Query: 64 TSMSDL-----IFTWKLDGVPEKNGTDTYVRIKSFYMRPDVGNMISHLNNENPETRELTN 118
+M DL I+ K EKNG +TY+RIK ++ + + N +EL
Sbjct: 150 ITMYDLKSHNDIYCEKY----EKNG-ETYLRIKKHAVKFNPAKVKLRFENLFDGNKELGE 204
Query: 119 LGTSFLNQNWRVLYRELLPYAQSNWDKIGTNVANKIFSKVPYDQIFP 165
F+N+N +L++EL + + + T + N+IF++VP+D+IFP
Sbjct: 205 QMNRFINENSELLFKELQAAYEETFSLVFTKIDNEIFNRVPFDKIFP 251
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 66 MSDLIFT--WKLDGVPEKNGTDTY 87
+SD I W L G+P K T TY
Sbjct: 151 LSDFITNGEWYLIGMPGKKNTITY 174
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 66 MSDLIFT--WKLDGVPEKNGTDTY 87
+SD I W L G+P K T TY
Sbjct: 151 LSDFITNGEWYLIGMPGKKNTITY 174
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 66 MSDLIFT--WKLDGVPEKNGTDTY 87
+SD I W L G+P K T TY
Sbjct: 151 LSDFITNGEWYLIGMPGKKNTITY 174
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 66 MSDLIFT--WKLDGVPEKNGTDTY 87
+SD I W L G+P K T TY
Sbjct: 151 LSDFITNGEWYLIGMPGKKNTITY 174
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 66 MSDLIFT--WKLDGVPEKNGTDTY 87
+SD I W L G+P K T TY
Sbjct: 151 LSDFITNGEWYLIGMPGKKNTITY 174
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 66 MSDLIFT--WKLDGVPEKNGTDTY 87
+SD I W L G+P K T TY
Sbjct: 151 LSDFITNGEWYLIGMPGKKNTITY 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 66 MSDLIFT--WKLDGVPEKNGTDTY 87
+SD I W L G+P K T TY
Sbjct: 219 LSDFITNGEWYLIGMPGKKNTITY 242
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 6.4
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 66 MSDLIFT--WKLDGVPEKNGTDTY 87
+SD I W L G+P K T TY
Sbjct: 219 LSDFITNGEWYLIGMPGKKNTITY 242
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.317 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,163
Number of Sequences: 429
Number of extensions: 2031
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 168
length of database: 140,377
effective HSP length: 53
effective length of query: 115
effective length of database: 117,640
effective search space: 13528600
effective search space used: 13528600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 41 (20.6 bits)
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