GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003717-TA|BGIBMGA003717-
PA|IPR000023|Phosphofructokinase, IPR009161|6-phosphofructokinase,
eukaryotic type
         (812 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          25   3.3  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    24   4.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   5.7  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           24   5.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   5.7  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/31 (35%), Positives = 20/31 (64%)

Query: 503 LIIGGFEAYQASLELYESRAEFPEFCIPLVV 533
           ++IGGFE  ++  + + ++A+  E  IPL V
Sbjct: 54  IVIGGFEIEKSEDDSFNNQADKSEKRIPLYV 84


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 645 QQDVYHMASKMTGGIQRGLILRNEKANDNYNTEFIYRLY 683
           + D  H +    GG +R ++LR   + D+ N+   Y  +
Sbjct: 55  ESDDLHESDGRVGGKRRNILLRRTDSMDSQNSASTYNSF 93


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 694 RMNVLGHMQQGGSPTPFDRNMGTKMAAKCLHWLVEKIQ 731
           R+ +LG +       P   NMG K  +  L W+ E I+
Sbjct: 159 RLGILGFLSTEDEVVP--GNMGLKDQSMALRWVSENIE 194


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 694 RMNVLGHMQQGGSPTPFDRNMGTKMAAKCLHWLVEKIQ 731
           R+ +LG +       P   NMG K  +  L W+ E I+
Sbjct: 30  RLGILGFLSTEDEVVP--GNMGLKDQSMALRWVSENIE 65


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 694 RMNVLGHMQQGGSPTPFDRNMGTKMAAKCLHWLVEKIQ 731
           R+ +LG +       P   NMG K  +  L W+ E I+
Sbjct: 159 RLGILGFLSTEDEVVP--GNMGLKDQSMALRWVSENIE 194


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.135    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,572
Number of Sequences: 429
Number of extensions: 9176
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 32
Number of HSP's gapped (non-prelim): 5
length of query: 812
length of database: 140,377
effective HSP length: 63
effective length of query: 749
effective length of database: 113,350
effective search space: 84899150
effective search space used: 84899150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)