Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003705-TA|BGIBMGA003705-PA|IPR007087|Zinc finger,
C2H2-type
(649 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 62 1e-11
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 40 6e-05
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 38 2e-04
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 37 6e-04
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 36 0.001
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 34 0.004
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 34 0.004
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 27 0.63
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 23 5.9
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 62.5 bits (145), Expect = 1e-11
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 22/206 (10%)
Query: 65 CNQCDAALPDFEAFRAHLKGHLEEGGELTRSSPAPCLQCGSTYADAAASERYLTAHYLAV 124
C C A +++HL+ H +EG P C CG T+A A LT HY
Sbjct: 64 CLLCQKAFDQKNLYQSHLRSHGKEG-----EDPYRCNICGKTFAVPAR----LTRHYRTH 114
Query: 125 SCE--YTCHSCARSFSTPDDLQKHLLDLHAHHLYRCSLCKEIFDSKVAIQVHFAVAHSGE 182
+ E Y C C++SFS ++L H Y+C +C+ F+ + H + H+GE
Sbjct: 115 TGEKPYQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRI-HTGE 173
Query: 183 NKIWMCRSCGGSGGALRSEAEGVAHVRARHGAGVSRC-TCG-----ALQAGXXXXXXXXX 236
+ C C + + V H+R G C CG + Q
Sbjct: 174 -RPHKCTVCSKT---FIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGE 229
Query: 237 XXXXXXACTENFAVQYLLERHMQAHH 262
C ++F ++L+ H AH+
Sbjct: 230 KPYTCDICGKSFGYNHVLKLHQVAHY 255
Score = 56.8 bits (131), Expect = 5e-10
Identities = 47/211 (22%), Positives = 73/211 (34%), Gaps = 17/211 (8%)
Query: 353 KCLICDEVLPSAAVLAEHKLTHCKVVAGD-TCSRCRARLPSEESFLTHMARHHPALPAPC 411
+CL+C + + H +H K C+ C H H P C
Sbjct: 63 QCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQC 122
Query: 412 VVCRQTLASEAEARLHARFHLRPSEDEQRCAICLRALPENEAGEGARACSSCYAXXXXXX 471
C ++ + + +H R H + E +C +C RA +G+ R
Sbjct: 123 EYCSKSFSVKENLSVHRRIHTK--ERPYKCDVCERAF--EHSGKLHR---------HMRI 169
Query: 472 XXXXXXXXCRLCRRALGSPTRLQAHLIEHTFAGIGAFTCYLCSAVFTSAAGLQRHLPEHS 531
C +C + +L H+ HT G + C C FT + L+ H H+
Sbjct: 170 HTGERPHKCTVCSKTFIQSGQLVIHMRTHT--GEKPYVCKACGKGFTCSKQLKVHTRTHT 227
Query: 532 AAPRPYDCGRCGLKFFFRAELDNHAFVHIEE 562
+PY C CG F + L H H E
Sbjct: 228 GE-KPYTCDICGKSFGYNHVLKLHQVAHYGE 257
Score = 46.8 bits (106), Expect = 6e-07
Identities = 48/216 (22%), Positives = 67/216 (31%), Gaps = 18/216 (8%)
Query: 316 KNGAVALQCAYCGERTRSRAELEXXXXXXXXXXXXXXKCLICDEVLPSAAVLAEHKLTHC 375
K G +C CG+ A L +C C + L+ H+ H
Sbjct: 86 KEGEDPYRCNICGKTFAVPARL--TRHYRTHTGEKPYQCEYCSKSFSVKENLSVHRRIHT 143
Query: 376 KVVAGDTCSRCRARLPSEESFLTHMARHHPALPAPCVVCRQTLASEAEARLHARFHLRPS 435
K C C HM H P C VC +T + +H R H
Sbjct: 144 KE-RPYKCDVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMRTH--TG 200
Query: 436 EDEQRCAICLRALPENEAGEGARACSSCYAXXXXXXXXXXXXXXCRLCRRALGSPTRLQA 495
E C C G+G CS C +C ++ G L+
Sbjct: 201 EKPYVCKAC---------GKGF-TCSK-QLKVHTRTHTGEKPYTCDICGKSFGYNHVLKL 249
Query: 496 HLIEHTFAGIGAFTCYLCSAVFTSAAGLQRHLPEHS 531
H + H G + C LC F S ++ H+ HS
Sbjct: 250 HQVAH--YGEKVYKCTLCHETFGSKKTMELHIKTHS 283
Score = 46.8 bits (106), Expect = 6e-07
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 93 TRSSPAPCLQCGSTYADAAASERYLTAHYLAVSCEYTCHSCARSFSTPDDLQKHLLDLHA 152
T P C CG + + + + H YTC C +SF L+ H + +
Sbjct: 199 TGEKPYVCKACGKGFTCSKQLKVHTRTH--TGEKPYTCDICGKSFGYNHVLKLHQVAHYG 256
Query: 153 HHLYRCSLCKEIFDSKVAIQVHFAVAHSGENKI 185
+Y+C+LC E F SK +++H HS + +
Sbjct: 257 EKVYKCTLCHETFGSKKTMELHIK-THSDSSVV 288
Score = 39.9 bits (89), Expect = 6e-05
Identities = 36/192 (18%), Positives = 55/192 (28%), Gaps = 16/192 (8%)
Query: 314 RRKNGAVALQCAYCGERTRSRAELEXXXXXXXXXXXXXXKCLICDEVLPSAAVLAEHKLT 373
R G QC YC + + L KC +C+ + L H
Sbjct: 112 RTHTGEKPYQCEYCSKSFSVKENLSVHRRIHTKERPY--KCDVCERAFEHSGKLHRHMRI 169
Query: 374 HCKVVAGDTCSRCRARLPSEESFLTHMARHHPALPAPCVVCRQTLASEAEARLHARFHLR 433
H C+ C + HM H P C C + + ++H R H
Sbjct: 170 HTGE-RPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTH-- 226
Query: 434 PSEDEQRCAICLRALPENEAGEGARACSSCYAXXXXXXXXXXXXXXCRLCRRALGSPTRL 493
E C IC ++ N C LC GS +
Sbjct: 227 TGEKPYTCDICGKSFGYNHV-----------LKLHQVAHYGEKVYKCTLCHETFGSKKTM 275
Query: 494 QAHLIEHTFAGI 505
+ H+ H+ + +
Sbjct: 276 ELHIKTHSDSSV 287
Score = 39.9 bits (89), Expect = 6e-05
Identities = 37/156 (23%), Positives = 56/156 (35%), Gaps = 14/156 (8%)
Query: 65 CNQCDAALPDFEAFRAHLKGHLEEGGELTRSSPAPCLQCGSTYADAAASERYLTAHYLAV 124
C C + E H + H T+ P C C + + R++ H
Sbjct: 122 CEYCSKSFSVKENLSVHRRIH-------TKERPYKCDVCERAFEHSGKLHRHMRIH--TG 172
Query: 125 SCEYTCHSCARSFSTPDDLQKHLLDLHAHHLYRCSLCKEIFDSKVAIQVHFAVAHSGENK 184
+ C C+++F L H+ Y C C + F ++VH H+GE K
Sbjct: 173 ERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVH-TRTHTGE-K 230
Query: 185 IWMCRSCGGSGGALRSEAEGVAHVRARHGAGVSRCT 220
+ C CG S G H A +G V +CT
Sbjct: 231 PYTCDICGKSFGYNHVLK---LHQVAHYGEKVYKCT 263
Score = 35.1 bits (77), Expect = 0.002
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 508 FTCYLCSAVFTSAAGLQRHLPEH-SAAPRPYDCGRCGLKFFFRAELDNHAFVHIEE 562
+ C LC F Q HL H PY C CG F A L H H E
Sbjct: 62 YQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGE 117
Score = 29.1 bits (62), Expect = 0.12
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 156 YRCSLCKEIFDSKVAIQVHFAVAHSGENK-IWMCRSCG 192
Y+C LC++ FD K Q H +H E + + C CG
Sbjct: 62 YQCLLCQKAFDQKNLYQSHLR-SHGKEGEDPYRCNICG 98
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 39.9 bits (89), Expect = 6e-05
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 128 YTCHSCARSFSTPDDLQKHLLDLHAHHL--YRCSLCKEIFDSKVAIQVHFAVAH 179
+TC C + + L++H+ D HA YRC +C+ ++ S+ ++ H H
Sbjct: 6 FTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYH 59
Score = 36.7 bits (81), Expect = 6e-04
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 508 FTCYLCSAVFTSAAGLQRHLPE-HSAAPRPYDCGRCGLKFFFRAELDNHAFVH 559
FTC LC V S A L+RH+ + H+ Y C C + R L H + +
Sbjct: 6 FTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTY 58
Score = 32.3 bits (70), Expect = 0.013
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 480 CRLCRRALGSPTRLQAHLIEHTFAGIGAFTCYLCSAVFTSAAGLQRHLPEHSAAPRPYDC 539
C+LC + L S L+ H+ + + C +C V+ S L H+ + + RP
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYHKS-RP--- 63
Query: 540 GRCGLKFF 547
G +KFF
Sbjct: 64 GDIDIKFF 71
Score = 30.7 bits (66), Expect = 0.039
Identities = 17/58 (29%), Positives = 24/58 (41%)
Query: 324 CAYCGERTRSRAELEXXXXXXXXXXXXXXKCLICDEVLPSAAVLAEHKLTHCKVVAGD 381
C CG+ S+A L+ +C+IC+ V S L H T+ K GD
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYHKSRPGD 65
Score = 30.7 bits (66), Expect = 0.039
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 100 CLQCGSTYADAAASERYLTAHYLAVSCEYTCHSCARSFSTPDDLQKHLLDLH 151
C CG A+ +R++ + EY C C R + + + L H+ H
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYH 59
Score = 30.3 bits (65), Expect = 0.052
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 152 AHHLYRCSLCKEIFDSKVAIQVHFAVAHSGENKIWMCRSC 191
A L+ C LC ++ SK +++ H A H+ + + C C
Sbjct: 2 AKKLFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVIC 41
Score = 29.1 bits (62), Expect = 0.12
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 411 CVVCRQTLASEAEARLHARFHLRPSEDEQRCAICLR 446
C +C + L S+A + H ++E RC IC R
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQEEYRCVICER 43
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 38.3 bits (85), Expect = 2e-04
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 499 EHTFAGIGAFTCYLCSAVFTSAAGLQRHLPEHSAAPRPYDCGRCGLKFFFRAELDNHAFV 558
E T G F C C FT L+ H+ H+ +PY C C +F A L H V
Sbjct: 1 ERTHTGEKPFECPECHKRFTRDHHLKTHMRLHTGE-KPYHCSHCDRQFVQVANLRRHLRV 59
Query: 559 HIEE 562
H E
Sbjct: 60 HTGE 63
Score = 34.7 bits (76), Expect = 0.002
Identities = 18/62 (29%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 383 CSRCRARLPSEESFLTHMARHHPALPAPCVVCRQTLASEAEARLHARFHLRPSEDEQRCA 442
C C R + THM H P C C + A R H R H E C
Sbjct: 12 CPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVH--TGERPYACE 69
Query: 443 IC 444
+C
Sbjct: 70 LC 71
Score = 30.3 bits (65), Expect = 0.052
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 128 YTCHSCARSFSTPDDLQKHLLDLHAHHLYRCSLCKEIFDSKVAIQVHFAVAHSGENKIWM 187
+ C C + F+ L+ H+ Y CS C F ++ H V H+GE + +
Sbjct: 10 FECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRV-HTGE-RPYA 67
Query: 188 CRSC 191
C C
Sbjct: 68 CELC 71
Score = 29.1 bits (62), Expect = 0.12
Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 93 TRSSPAPCLQCGSTYADAAASERYLTAHYLAVSCEYTCHSCARSFSTPDDLQKHLLDLHA 152
T P C +C + + ++ H Y C C R F +L++HL
Sbjct: 5 TGEKPFECPECHKRFTRDHHLKTHMRLH--TGEKPYHCSHCDRQFVQVANLRRHLRVHTG 62
Query: 153 HHLYRCSLC 161
Y C LC
Sbjct: 63 ERPYACELC 71
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 36.7 bits (81), Expect = 6e-04
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 130 CHSCARSFSTPDDLQKHLLDLHAHH--LYRCSLCKEIFDSKVAIQVHFAVAHSGEN 183
C C R+FS L++H D H LY C C + +K ++ H ++ H G +
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQHRGSS 63
Score = 25.8 bits (54), Expect = 1.1
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 158 CSLCKEIFDSKVAIQVHFAVAHSGENKIWMCRSC 191
C C+ F +++ HF H + +++C C
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFC 41
Score = 25.0 bits (52), Expect = 1.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 244 CTENFAVQYLLERHMQAHH 262
C NF+ Y L+RH Q H
Sbjct: 11 CRRNFSCYYSLKRHFQDKH 29
Score = 24.6 bits (51), Expect = 2.6
Identities = 11/52 (21%), Positives = 20/52 (38%)
Query: 95 SSPAPCLQCGSTYADAAASERYLTAHYLAVSCEYTCHSCARSFSTPDDLQKH 146
+ P C C ++ + +R+ + Y C C R + T + L H
Sbjct: 3 NEPQECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTH 54
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 35.9 bits (79), Expect = 0.001
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Query: 100 CLQCGSTYADAAASERYLTAHYLAVSCEYTCHSCARSFSTPDDLQKHLLDLHAHHLYRCS 159
C C Y A + ++ H L C+ CH C ++FS P LQ H+ + C
Sbjct: 19 CKYCEKVYVSLGALKMHIRTHTLP--CK--CHLCGKAFSRPWLLQGHIRTHTGEKPFSCQ 74
Query: 160 LCKEIF 165
C F
Sbjct: 75 HCNRAF 80
Score = 32.3 bits (70), Expect = 0.013
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 480 CRLCRRALGSPTRLQAHLIEHTFAGIGAFTCYLCSAVF 517
C LC +A P LQ H+ HT G F+C C+ F
Sbjct: 45 CHLCGKAFSRPWLLQGHIRTHT--GEKPFSCQHCNRAF 80
Score = 31.5 bits (68), Expect = 0.022
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 507 AFTCYLCSAVFTSAAGLQRHLPEHSAAPRPYDCGRCGLKFFFRAELDNHAFVHIEE 562
+F+C C V+ S L+ H+ H+ P C CG F L H H E
Sbjct: 16 SFSCKYCEKVYVSLGALKMHIRTHTL---PCKCHLCGKAFSRPWLLQGHIRTHTGE 68
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 33.9 bits (74), Expect = 0.004
Identities = 13/60 (21%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 127 EYTCHSCARSFSTPDDLQKHLLDLHAHHLYR--CSLCKEIFDSKVAIQVHFAVAHSGENK 184
E+ C C + ++ L++H+ ++H C++CK ++ S +++ H ++ H +K
Sbjct: 2 EFRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQHSK 61
Score = 28.3 bits (60), Expect = 0.21
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 480 CRLCRRALGSPTRLQAHLIE-HTFAGIGAFTCYLCSAVFTSAAGLQRH 526
C C + L S TRL+ H+ HT C +C V++S L+ H
Sbjct: 5 CEPCNKILTSLTRLRRHIQNVHTRPSKEPI-CNICKRVYSSLNSLRNH 51
Score = 27.5 bits (58), Expect = 0.36
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 508 FTCYLCSAVFTSAAGLQRHLPE-HSAAPRPYDCGRCGLKFFFRAELDNHAFVH 559
F C C+ + TS L+RH+ H+ + C C + L NH ++
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIY 55
Score = 26.6 bits (56), Expect = 0.63
Identities = 13/55 (23%), Positives = 21/55 (38%)
Query: 100 CLQCGSTYADAAASERYLTAHYLAVSCEYTCHSCARSFSTPDDLQKHLLDLHAHH 154
C C R++ + S E C+ C R +S+ + L+ H H H
Sbjct: 5 CEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQH 59
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 33.9 bits (74), Expect = 0.004
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 128 YTCHSCARSFSTPDDLQKHLLDLHAHHLYR--CSLCKEIFDSKVAIQVHFAVAH 179
YTC C ++ ST L++H H L C+LC ++F + ++ H ++ H
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIYH 425
Score = 25.0 bits (52), Expect = 1.9
Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 508 FTCYLCSAVFTSAAGLQRHLPEHSAAP-RPYDCGRCGLKFFFRAELDNHAFVH 559
+TC +C ++ L+RH + P C C F L+NH ++
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIY 424
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 26.6 bits (56), Expect = 0.63
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 493 LQAHLIEHTFAGIGAFTCYLCSAVFTSAAGLQRHLPEHSAAPRPYDCGRC 542
L+ HL H G F C CS + + L HL HS + Y C C
Sbjct: 4 LEYHLRNHF--GSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQ-YRCANC 50
Score = 23.8 bits (49), Expect = 4.5
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 114 ERYLTAHYLAVSCEYTCHSCARSFSTPDDLQKHLLDLHAHHLYRCSLC 161
E +L H+ S + C C+ S L HL + YRC+ C
Sbjct: 5 EYHLRNHF--GSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANC 50
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 23.4 bits (48), Expect = 5.9
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 407 LPAPCVVCRQTLASEAEARLHARFHLRPSEDEQRCAICLRA 447
LP CV CR EA R H L+ ++ C + LRA
Sbjct: 36 LPTECVFCRNNGEEEAYYRKHL---LKDADGRVSCPV-LRA 72
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.322 0.133 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,991
Number of Sequences: 429
Number of extensions: 5481
Number of successful extensions: 67
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 45
length of query: 649
length of database: 140,377
effective HSP length: 62
effective length of query: 587
effective length of database: 113,779
effective search space: 66788273
effective search space used: 66788273
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)
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