GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003701-TA|BGIBMGA003701-
PA|IPR004843|Metallophosphoesterase
         (366 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    25   1.4  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    25   1.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   5.5  

>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 11/25 (44%), Positives = 19/25 (76%), Gaps = 1/25 (4%)

Query: 82  QTIMMMLSPDVVFVLGDLFDEGEWT 106
           +TI++ L P V F+LG++F E ++T
Sbjct: 2   KTILIALVP-VCFLLGEVFSEDKYT 25


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 11/25 (44%), Positives = 19/25 (76%), Gaps = 1/25 (4%)

Query: 82  QTIMMMLSPDVVFVLGDLFDEGEWT 106
           +TI++ L P V F+LG++F E ++T
Sbjct: 2   KTILIALVP-VCFLLGEVFSEDKYT 25


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 25  IIYFIVIAQCNWPVTN 40
           ++Y  VI +C  PVTN
Sbjct: 705 VLYGFVIIECQEPVTN 720


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.139    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,149
Number of Sequences: 429
Number of extensions: 4659
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 3
length of query: 366
length of database: 140,377
effective HSP length: 59
effective length of query: 307
effective length of database: 115,066
effective search space: 35325262
effective search space used: 35325262
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)