GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003698-TA|BGIBMGA003698-PA|IPR010342|Protein of unknown
function DUF938
         (210 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   3.7  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   6.5  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   6.5  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 4   QKLIYPAATRNQEPILQVLKRFVTYDCAEDDSPFF 38
           +KL+          +L+ +   ++YDC  D S FF
Sbjct: 106 EKLLCNVEAEENYNLLEDIYETLSYDCDVDVSTFF 140


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase
          protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 56 FPNIKFQPTEFDETLLGSIK 75
          F  +K + T FD TLL  I+
Sbjct: 19 FDQLKTKKTSFDSTLLDCIQ 38


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase
          protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 56 FPNIKFQPTEFDETLLGSIK 75
          F  +K + T FD TLL  I+
Sbjct: 35 FDQLKTKKTSFDSTLLDCIQ 54


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.137    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,907
Number of Sequences: 429
Number of extensions: 2624
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 210
length of database: 140,377
effective HSP length: 55
effective length of query: 155
effective length of database: 116,782
effective search space: 18101210
effective search space used: 18101210
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)