Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003697-TA|BGIBMGA003697-PA|IPR001627|Semaphorin/CD100
antigen, IPR002165|Plexin, IPR003659|Plexin/semaphorin/integrin
(677 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 29 0.16
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 27 0.38
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 25 2.0
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 25 2.7
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 24 3.5
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 24 3.5
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 24 3.5
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 24 3.5
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 24 3.5
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 24 4.7
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 8.2
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 28.7 bits (61), Expect = 0.16
Identities = 22/101 (21%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query: 476 SKEQQCSWVGNRQFPNPERFLQNVEHGKTDICNKLPALLPGERHSNRNPGTKKPSSSESE 535
S+E++CS NR++ +R + + + K + + + R R + K +S +
Sbjct: 232 SRERRCSRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQRSYKNENSYRK 291
Query: 536 ARQKTDD-IQNEIFIEEVLETNVIAEEKNS--HNNKHETDL 573
R+ + + ++ I E E +I+ N+ HNN + L
Sbjct: 292 YRETSKERSRDRIERERSREPKIISSLSNNTIHNNNYNKKL 332
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 27.5 bits (58), Expect = 0.38
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 476 SKEQQCSWVGNRQFPNPERFLQNVEHGKTDICNKLPALLPGER--------HSNRNPGTK 527
S+E+ CS NR++ +R + + + K + + + R + N N K
Sbjct: 237 SRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSYRK 296
Query: 528 KPSSSESEARQKTD-DIQNEIFIEEVLETNVIAEEKNSHNNKH 569
+S+ +R KT+ + E I L N I+ N +NN +
Sbjct: 297 YRETSKERSRDKTERERSKERKIISSLSNNYISNISNYNNNNN 339
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 25.0 bits (52), Expect = 2.0
Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 476 SKEQQCSWVGNRQFPNPERFLQNVEHGKTDICNKLPALLPGERHSNRNPGTKKPSSSESE 535
S+E+ CS NR++ +R + + + K + + + R R + K +S +
Sbjct: 232 SRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSYRK 291
Query: 536 ARQKTDD-IQNEIFIEEVLETNVIAEEKNSHN 566
R+ + + ++ E E +I+ N++N
Sbjct: 292 YRETSKERSRDRTERERSKERKIISSLSNNYN 323
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 24.6 bits (51), Expect = 2.7
Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Query: 476 SKEQQCSWVGNRQFPNPERFLQNVEHGKTDICNKLPALLPGERHSNRNPGTKKPSSSESE 535
S+E+ CS NR++ +R + + + K + + + R R + K +
Sbjct: 232 SRERSCSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKNEREYRK 291
Query: 536 ARQKTDD-IQNEIFIEEVLETNVIA--EEKNSHNNKH 569
R+++ + ++ E E +I+ K HNN +
Sbjct: 292 YRERSKERSRDRTERERSREPKIISSLSNKTIHNNNN 328
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 24.2 bits (50), Expect = 3.5
Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 51 LDRDDFSIIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQLKGKSPDECQNYPRI 110
LDR + ++ +T+ + + +NV Q +T+ ++ L L ++ + N +
Sbjct: 334 LDRQNIDVVARNEDTLQMVVSMKIKQNVPQSGRVNNTQRNEYLLALSDRNQNVLNNDLNL 393
Query: 111 AVRAHGRFLVCGTN 124
H F + G N
Sbjct: 394 ---EHVNFQILGAN 404
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 24.2 bits (50), Expect = 3.5
Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 476 SKEQQCSWVGNRQFPNPERFLQNVEHGKTDICNKLPALLPGERHSNRNPGTKKPSSSESE 535
S+E+ CS NR++ +R + + + K + + + R R + K +S +
Sbjct: 221 SRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSYRK 280
Query: 536 ARQKTDD-IQNEIFIEEVLETNVIAEEKNS--HNNKH 569
R+ + + ++ E E +I+ N+ HNN +
Sbjct: 281 YRETSKERSRDRTERERSREPKIISSLLNNTIHNNNN 317
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 24.2 bits (50), Expect = 3.5
Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 476 SKEQQCSWVGNRQFPNPERFLQNVEHGKTDICNKLPALLPGERHSNRNPGTKKPSSSESE 535
S+E+ CS NR++ +R + + + K + + + R R + K +S +
Sbjct: 232 SRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSYRK 291
Query: 536 ARQKTDD-IQNEIFIEEVLETNVIAEEKNS--HNNKH 569
R+ + + ++ E E +I+ N+ HNN +
Sbjct: 292 YRETSKERSRDRTERERSREPKIISSLLNNTIHNNNN 328
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 24.2 bits (50), Expect = 3.5
Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 476 SKEQQCSWVGNRQFPNPERFLQNVEHGKTDICNKLPALLPGERHSNRNPGTKKPSSSESE 535
S+E+ CS NR++ +R + + + K + + + R R + K +S +
Sbjct: 232 SRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSYRK 291
Query: 536 ARQKTDD-IQNEIFIEEVLETNVIAEEKNS--HNNKH 569
R+ + + ++ E E +I+ N+ HNN +
Sbjct: 292 YRETSKERSRDRTERERSREPKIISSLLNNTIHNNNN 328
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 24.2 bits (50), Expect = 3.5
Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 476 SKEQQCSWVGNRQFPNPERFLQNVEHGKTDICNKLPALLPGERHSNRNPGTKKPSSSESE 535
S+E+ CS NR++ +R + + + K + + + R R + K +S +
Sbjct: 221 SRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSYRK 280
Query: 536 ARQKTDD-IQNEIFIEEVLETNVIAEEKNS--HNNKH 569
R+ + + ++ E E +I+ N+ HNN +
Sbjct: 281 YRETSKERSRDRTERERSREPKIISSLLNNTIHNNNN 317
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.8 bits (49), Expect = 4.7
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 476 SKEQQCSWVGNRQFPNPERFLQNVEHGKTDICNKLPALLPGERHSNRNPGTKKPSSSESE 535
S+E+ CS NR++ +R + + + K + + + R R + K +S +
Sbjct: 232 SRERSCSRDRNREYREKDRRYEKLHNEKEKLLEERTSRKRYSRSREREKKSYKNENSYRK 291
Query: 536 ARQKTDD-IQNEIFIEEVLETNVIA--EEKNSHNNKH 569
R+ + + ++ E E +I+ K HNN +
Sbjct: 292 YRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNN 328
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.0 bits (47), Expect = 8.2
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 178 GTDPLIYREPAVYSRVARIC---LNDKGGP 204
G +P+ R PAV SR+ I L +GGP
Sbjct: 370 GENPVTQRLPAVLSRIGIILASPLKREGGP 399
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.317 0.133 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,810
Number of Sequences: 429
Number of extensions: 10122
Number of successful extensions: 30
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 29
Number of HSP's gapped (non-prelim): 11
length of query: 677
length of database: 140,377
effective HSP length: 62
effective length of query: 615
effective length of database: 113,779
effective search space: 69974085
effective search space used: 69974085
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)
- SilkBase 1999-2023 -