GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003695-TA|BGIBMGA003695-PA|IPR000863|Sulfotransferase
         (219 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    24   0.97 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.2  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   9.0  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   9.0  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   9.0  

>AF023666-1|AAC14552.1|  363|Apis mellifera
          sn-glycerol-3-phosphate dehydrogenase protein.
          Length = 363

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 15/52 (28%), Positives = 22/52 (42%)

Query: 13 IVPGCELLAAATDPRFIKSHLPLSMLPPNLIETAKVVYVGRDPRDLVVSLYH 64
          I+ G +L     +      +LP   LPPN+I    VV   +D   L   + H
Sbjct: 45 IINGKKLTEIINETHENVKYLPGHKLPPNIIAIPDVVEAAKDADILTFVVPH 96


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 13/48 (27%), Positives = 20/48 (41%)

Query: 60  VSLYHFSRLISVPLYTGDFKTFWNMYMNDNVVRAPHLSHVKEAWDLRN 107
           +S ++   +I V LY   FK   N        R P+L  +K    + N
Sbjct: 349 LSSFYIPCIIMVFLYYNIFKALRNRARKARANRKPNLGDIKPGSIIEN 396


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 109 PNMLFLFYEELKQDLPGTIKRIAIFF 134
           P + FL Y     +LPG+     +FF
Sbjct: 356 PGLAFLVYPSAVLELPGSSIWSCLFF 381


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 109 PNMLFLFYEELKQDLPGTIKRIAIFF 134
           P + FL Y     +LPG+     +FF
Sbjct: 409 PGLAFLVYPSAVLELPGSSIWSCLFF 434


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 27  RFIKSHLPLSMLPPNLIETAKVVYVGRDPRDLVVSLY 63
           RF+K+  P ++L  +L E   +   GR      V+LY
Sbjct: 187 RFLKNPRPCNVLATSLTEPYTLRNYGRRINCTYVALY 223


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.140    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,158
Number of Sequences: 429
Number of extensions: 3461
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 219
length of database: 140,377
effective HSP length: 55
effective length of query: 164
effective length of database: 116,782
effective search space: 19152248
effective search space used: 19152248
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)