GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003658-TA|BGIBMGA003658-PA|IPR000683|Oxidoreductase,
N-terminal, IPR004104|Oxidoreductase, C-terminal
         (336 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    28   0.100
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    28   0.100
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              25   0.93 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   1.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   8.7  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 28.3 bits (60), Expect = 0.100
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 62  ESNEIDVAYIGALNPDHYNISKLFLENGKHVLCEKPLCLNYKQAESLIRFAKSKKLFLME 121
           E ++ +V    +L+ D   I ++ LE  K V C+     NY+ A S I  A +K+LF + 
Sbjct: 189 ERDQSEVESTSSLHSD-MPIERI-LEAEKRVECKMEQQGNYENAVSHICNATNKQLFQLV 246

Query: 122 AVWSRFSPTYIAIEKE 137
           A W++  P + ++  E
Sbjct: 247 A-WAKHIPHFTSLPLE 261


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 28.3 bits (60), Expect = 0.100
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 62  ESNEIDVAYIGALNPDHYNISKLFLENGKHVLCEKPLCLNYKQAESLIRFAKSKKLFLME 121
           E ++ +V    +L+ D   I ++ LE  K V C+     NY+ A S I  A +K+LF + 
Sbjct: 189 ERDQSEVESTSSLHSD-MPIERI-LEAEKRVECKMEQQGNYENAVSHICNATNKQLFQLV 246

Query: 122 AVWSRFSPTYIAIEKE 137
           A W++  P + ++  E
Sbjct: 247 A-WAKHIPHFTSLPLE 261


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.93
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 12  KISHDFVNAFNSYPNKGDQVITAVAARTKPEEFAKLHNIPIVFDSYKAL 60
           KIS D V A  +  N+ DQ++   +  + P    K+  I   F  YK +
Sbjct: 82  KISSDIVRAVLN-DNEADQLLAECSPISDPNALIKISKILECFFKYKTI 129


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 279 RNSAGLVYQALEVEKCLKEGLIESPRMSHKESLVLAKLEQTVRKQLGVYY 328
           R  A +   +  V +   E LI  PR++ K   VL   E+    Q+GV++
Sbjct: 26  RRQASVEQPSFSVHQVYPENLI--PRLAKKAIQVLGVTEKEFFDQMGVHF 73


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 12/56 (21%), Positives = 27/56 (48%)

Query: 95   EKPLCLNYKQAESLIRFAKSKKLFLMEAVWSRFSPTYIAIEKEINSGKLGDVMFVE 150
            ++ L L  ++ E ++      K+FL  +  S F  TY+    +  + ++ D++  E
Sbjct: 1010 QRNLDLYRQEKEEMVELGVLDKIFLALSRESGFKKTYVQDLIQAEASQIYDMLVYE 1065


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.137    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,752
Number of Sequences: 429
Number of extensions: 4417
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 5
length of query: 336
length of database: 140,377
effective HSP length: 58
effective length of query: 278
effective length of database: 115,495
effective search space: 32107610
effective search space used: 32107610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)