GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003649-TA|BGIBMGA003649-PA|undefined
         (82 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   2.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   2.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   3.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   3.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    19   6.1  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 24   EYNVDVVRKDGLLLVRELAAEVKNYMDFKI 53
            E+    + K+G L  R +A+ V  Y D K+
Sbjct: 1584 EFTFVTLTKEGELSKRGIASTVPFYADVKV 1613


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 24   EYNVDVVRKDGLLLVRELAAEVKNYMDFKI 53
            E+    + K+G L  R +A+ V  Y D K+
Sbjct: 1580 EFTFVTLTKEGELSKRGIASTVPFYADVKV 1609


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 39  RELAAEVKNYMDFKINAVMPFRITIQTEANEDN 71
           R +   + N+M F  N   PF    +   N+ N
Sbjct: 279 RAIVETLANFMRFYYNPFTPFGPVTEKVNNDSN 311


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 39  RELAAEVKNYMDFKINAVMPFRITIQTEANEDN 71
           R +   + N+M F  N   PF    +   N+ N
Sbjct: 279 RAIVETLANFMRFYYNPFTPFGPVTEKVNNDSN 311


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.4 bits (38), Expect = 6.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 19  VLKYHEYNVDVVRKDGLLLVRELAAE 44
           VLK   + ++++ K  L +VR+   E
Sbjct: 476 VLKKGNFTIEILNKTVLAVVRQSEEE 501


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.136    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,360
Number of Sequences: 429
Number of extensions: 735
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 82
length of database: 140,377
effective HSP length: 47
effective length of query: 35
effective length of database: 120,214
effective search space:  4207490
effective search space used:  4207490
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.1 bits)
S2: 37 (19.0 bits)