GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003643-TA|BGIBMGA003643-PA|IPR007116|6-pyruvoyl
tetrahydropterin synthase, IPR007115|6-pyruvoyl tetrahydropterin
synthase and hypothetical protein
         (167 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   8.4  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   8.4  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 25  FLSDEENKKVYGKC 38
           FL+D+E+ KV+  C
Sbjct: 210 FLTDDEDTKVFVTC 223


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 25  FLSDEENKKVYGKC 38
           FL+D+E+ KV+  C
Sbjct: 210 FLTDDEDTKVFVTC 223


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.133    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,612
Number of Sequences: 429
Number of extensions: 2084
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 167
length of database: 140,377
effective HSP length: 53
effective length of query: 114
effective length of database: 117,640
effective search space: 13410960
effective search space used: 13410960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 41 (20.6 bits)