GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003642-TA|BGIBMGA003642-PA|undefined
         (67 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   0.18 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    19   6.7  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    18   8.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    18   8.9  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 0.18
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 6   GASPASDKRYVTARSTMQT 24
           G SPAS  RY++A +T  T
Sbjct: 820 GNSPASSPRYLSAAATSST 838



 Score = 21.8 bits (44), Expect = 0.72
 Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 3/38 (7%)

Query: 20  STMQTVGVCVGVCDALCWCHNT---SGRHCHSAPRLIA 54
           S   T   C G   +L   H+    SG H  SAP L A
Sbjct: 492 SVSSTESTCSGEVASLTEYHHVAPPSGHHASSAPLLAA 529



 Score = 19.4 bits (38), Expect = 3.8
 Identities = 10/37 (27%), Positives = 13/37 (35%)

Query: 20  STMQTVGVCVGVCDALCWCHNTSGRHCHSAPRLIAPQ 56
           S+      C      L   H+T  R     PR+ A Q
Sbjct: 684 SSQAQASQCPQTASLLSSTHSTLARSLMEGPRMTAEQ 720


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 18.6 bits (36), Expect = 6.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)

Query: 14  RYVTARSTMQTVGVC 28
           R +TAR T   +G C
Sbjct: 175 RELTARFTTDVIGSC 189


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
          carboxykinase protein.
          Length = 118

 Score = 18.2 bits (35), Expect = 8.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)

Query: 8  SPASDKRYVTA 18
          +P   KRY+TA
Sbjct: 6  NPKGKKRYITA 16


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 18.2 bits (35), Expect = 8.9
 Identities = 6/13 (46%), Positives = 7/13 (53%)

Query: 28  CVGVCDALCWCHN 40
           C   C A C C+N
Sbjct: 757 CEMTCPAGCKCYN 769


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.127    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,787
Number of Sequences: 429
Number of extensions: 382
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 67
length of database: 140,377
effective HSP length: 45
effective length of query: 22
effective length of database: 121,072
effective search space:  2663584
effective search space used:  2663584
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.1 bits)
S2: 35 (18.2 bits)