GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003631-TA|BGIBMGA003631-PA|IPR000683|Oxidoreductase,
N-terminal, IPR004104|Oxidoreductase, C-terminal
         (341 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    27   0.24 
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   6.7  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   6.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   8.8  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 27.1 bits (57), Expect = 0.24
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 259 ISAANSTEWTLPKGKYKFHFH 279
           +S  N T WT  +G+ +F+FH
Sbjct: 172 LSVFNGTGWTFHEGRKQFYFH 192


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 281 SAGLSYQIQECWDCINKGKLNEKQAGQKIALT 312
           +A +++       C   G+LN KQA   IA T
Sbjct: 147 NAAIAFDRYRTISCPIDGRLNSKQAAVIIAFT 178


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 281 SAGLSYQIQECWDCINKGKLNEKQAGQKIALT 312
           +A +++       C   G+LN KQA   IA T
Sbjct: 147 NAAIAFDRYRTISCPIDGRLNSKQAAVIIAFT 178


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 51  INTAYEGYEQLARDASIDIVFVSVLNLQHYEI 82
           I T  +     A+D S++ +F S+L  ++ +I
Sbjct: 286 IETTIQEKRDDAKDESVEAIFQSILRQKNLDI 317


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.137    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,729
Number of Sequences: 429
Number of extensions: 3259
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 4
length of query: 341
length of database: 140,377
effective HSP length: 58
effective length of query: 283
effective length of database: 115,495
effective search space: 32685085
effective search space used: 32685085
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)