GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003625-TA|BGIBMGA003625-PA|undefined
         (231 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.5  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   5.5  
AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    22   5.5  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    22   5.5  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   5.5  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 62  ATREQLMMQMGQRRGERPPNLPPRENGYGPADIPKPDYDDI 102
           A  E+   + G R    P   PP  N   P  +P PD  D+
Sbjct: 416 AVEEERQREYGIRVERDPILTPPSSNPVSP--VPSPDPLDL 454


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 3/28 (10%)

Query: 103 EANGRGPAQFPRGKSDKGKEKKYDDPYY 130
           + N R P  F   +  +GK+  +DD YY
Sbjct: 83  DINKRAPMGF---QGMRGKKASFDDEYY 107


>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 3/28 (10%)

Query: 103 EANGRGPAQFPRGKSDKGKEKKYDDPYY 130
           + N R P  F   +  +GK+  +DD YY
Sbjct: 84  DINKRAPMGF---QGMRGKKASFDDEYY 108


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 3/28 (10%)

Query: 103 EANGRGPAQFPRGKSDKGKEKKYDDPYY 130
           + N R P  F   +  +GK+  +DD YY
Sbjct: 83  DINKRAPMGF---QGMRGKKASFDDEYY 107


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 3/28 (10%)

Query: 103 EANGRGPAQFPRGKSDKGKEKKYDDPYY 130
           + N R P  F   +  +GK+  +DD YY
Sbjct: 83  DINKRAPMGF---QGMRGKKASFDDEYY 107


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.141    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,332
Number of Sequences: 429
Number of extensions: 3134
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 5
length of query: 231
length of database: 140,377
effective HSP length: 56
effective length of query: 175
effective length of database: 116,353
effective search space: 20361775
effective search space used: 20361775
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)