GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003622-TA|BGIBMGA003622-PA|IPR013594|Dynein heavy chain,
N-terminal region 1, IPR013602|Dynein heavy chain, N-terminal region
2, IPR011704|ATPase associated with various cellular activities,
AAA-5, IPR004273|Dynein heavy chain, IPR003593|AAA ATPase,
IPR000169|Peptidase, cysteine peptidase active site, IPR002110|Ankyrin
         (4380 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    26   7.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    26   7.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    26   7.8  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 124 VPLLSNPLNHEGWPLVVSQDILKQIHNLKSTVYEVKGKVNGQTVLPM--PVGVELVHEAE 181
           +PL+ N L+  G P  +   +LK+  N K     VK  V  + V+ +  P  VE++  + 
Sbjct: 50  LPLIGNALDLFGSPDAMFSQVLKKAENFKDV---VKIWVGPKLVICLIDPRDVEIILSSN 106

Query: 182 KEILKGKEVDLYLKSAIEGVVIKWAQQ 208
             I K  E   +     +G++I   Q+
Sbjct: 107 VYIDKSTEYRFFKPWLGDGLLISTGQK 133


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
            phosphatase protein.
          Length = 373

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 2731 NLVLFEDAMMHICRISRILESPR 2753
            N+ L ED ++    + R+LESPR
Sbjct: 123  NIFLPEDCLLFTIELDRVLESPR 145


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
            precursor protein.
          Length = 388

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 2731 NLVLFEDAMMHICRISRILESPR 2753
            N+ L ED ++    + R+LESPR
Sbjct: 138  NIFLPEDCLLFTIELDRVLESPR 160


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,200,741
Number of Sequences: 429
Number of extensions: 51487
Number of successful extensions: 109
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 107
Number of HSP's gapped (non-prelim): 3
length of query: 4380
length of database: 140,377
effective HSP length: 73
effective length of query: 4307
effective length of database: 109,060
effective search space: 469721420
effective search space used: 469721420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)