GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003607-TA|BGIBMGA003607-PA|IPR002290|Serine/threonine
protein kinase, IPR000719|Protein kinase, IPR011009|Protein
kinase-like
         (490 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    87   3e-19
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                73   5e-15
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    69   9e-14
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    64   3e-12
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    64   3e-12
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    54   4e-09
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    53   6e-09
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    24   2.5  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    24   2.5  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    24   3.3  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    23   4.4  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 87.0 bits (206), Expect = 3e-19
 Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 7/126 (5%)

Query: 114 GVFDEATIATVLKEVLKGLEYFHQNGQIHRDIKAGNILLGDDGTVQIADFGVSAWLATGR 173
           G FD+ T       V++  +Y H    I+RD+K  N+LL   G V++ DFG +  L  GR
Sbjct: 461 GHFDDGTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGR 520

Query: 174 DLSRQKVRHTFVGTPCWMAPEVMEQNHGYDFKADIWSFGITAIEMATGTAPYHKYPPMKV 233
                    TF GTP ++APEV+  N G+D  AD WS G+   E+ TGT P+    PMK 
Sbjct: 521 K------TWTFCGTPEYVAPEVI-LNKGHDISADYWSLGVLMFELLTGTPPFTGGDPMKT 573

Query: 234 LMLTLQ 239
             + L+
Sbjct: 574 YNIILK 579


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 72.9 bits (171), Expect = 5e-15
 Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 13/161 (8%)

Query: 124 VLKEVLKGLEYFHQNGQIHRDIKAGNILLGDDGTVQIADFGVSAWLATGRDLSRQKVRHT 183
           +LK +   L++ H  G +H D+K  NIL+  +G  ++ DFG S  +    ++ +      
Sbjct: 160 ILKSITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNEIDK------ 213

Query: 184 FVGTPCWMAPEVMEQNHGYDFKADIWSFGITAIEMATGTAPYHKYPPMKVLMLTLQNDPP 243
           F GTP + APEV++QN      ADI+S GI A +M     P+       ++ L+ +   P
Sbjct: 214 FYGTPGYTAPEVIKQNRPTP-AADIYSLGIVAWQMLFRKLPFAGLHSHTIIYLSAKGHRP 272

Query: 244 TLDTGAEEKDQYKAYGKTFRKMISECLQKDPTKRPSAPELL 284
            +D   +  D++K    T++ +  +   ++ T+RP+  E++
Sbjct: 273 -IDDNID--DEFKG---TYKTLYKQMWSQNITERPTTNEVI 307


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 68.9 bits (161), Expect = 9e-14
 Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 15/174 (8%)

Query: 116 FDEATIATVLKEVLKGLEYFHQNGQIHRDIKAGNILLGD---DGTVQIADFGVSAWLATG 172
           + EA  +  ++++L+ + + H NG +HRD+K  N+LL        V++ADFG++  +   
Sbjct: 6   YSEADASHCIQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-- 63

Query: 173 RDLSRQKVRHTFVGTPCWMAPEVMEQNHGYDFKADIWSFGITAIEMATGTAPYHKYPPMK 232
                 +    F GTP +++PEV+++   Y    DIW+ G+    +  G  P+      +
Sbjct: 64  ---GEAQAWFGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDEDQHR 119

Query: 233 VLMLTLQNDPPTLDTGAEEKDQYKAYGKTFRKMISECLQKDPTKRPSAPELLKH 286
              L  Q    + D  + E D      K    +I++ L  +P+KR +A E LKH
Sbjct: 120 ---LYAQIKTGSYDYPSPEWDTVTPEAK---NLINQMLTVNPSKRITASEALKH 167


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 63.7 bits (148), Expect = 3e-12
 Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 19/178 (10%)

Query: 127 EVLKGLEYFHQNGQIHRDIKAGNILLGDDGTVQIADFGVSAWLATGRDLSRQKVRHTFVG 186
           +VL+G+ Y H  G +HRD+K  N+LL  +   ++ DFG          ++   +  + VG
Sbjct: 705 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC--------ITEVMMLGSIVG 756

Query: 187 TPCWMAPEVMEQNHGYDFKADIWSFGITAIEMATG--TAPY--HKYPPMKVLMLTLQNDP 242
           TP  MAPE++  +  YD   D+++FGI    +  G    PY   ++   ++L  +++   
Sbjct: 757 TPVHMAPELLSGH--YDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKK-- 812

Query: 243 PTLDTGAEEKDQYKAYGKTFRKMISECLQKDPTKRPSAPELLK--HSFFKKAKDRKYL 298
             L       ++  ++     +++ +C   +P+KRP    ++    S  +KAK  K L
Sbjct: 813 -ALMIVGIRPERLPSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQKAKRSKSL 869


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 63.7 bits (148), Expect = 3e-12
 Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 19/178 (10%)

Query: 127 EVLKGLEYFHQNGQIHRDIKAGNILLGDDGTVQIADFGVSAWLATGRDLSRQKVRHTFVG 186
           +VL+G+ Y H  G +HRD+K  N+LL  +   ++ DFG          ++   +  + VG
Sbjct: 743 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC--------ITEVMMLGSIVG 794

Query: 187 TPCWMAPEVMEQNHGYDFKADIWSFGITAIEMATG--TAPY--HKYPPMKVLMLTLQNDP 242
           TP  MAPE++  +  YD   D+++FGI    +  G    PY   ++   ++L  +++   
Sbjct: 795 TPVHMAPELLSGH--YDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKK-- 850

Query: 243 PTLDTGAEEKDQYKAYGKTFRKMISECLQKDPTKRPSAPELLK--HSFFKKAKDRKYL 298
             L       ++  ++     +++ +C   +P+KRP    ++    S  +KAK  K L
Sbjct: 851 -ALMIVGIRPERLPSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQKAKRSKSL 907


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 53.6 bits (123), Expect = 4e-09
 Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 7/82 (8%)

Query: 107 RISNCKHGVFDEATIATVLKEVLKGLEYFHQNGQIHRDIKAGNILLGDDGTVQIADFGVS 166
           +I  C  G F E        E+  GL + H  G ++RD+K  N+LL  DG ++IADFG+ 
Sbjct: 75  QIQQC--GKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGMC 132

Query: 167 AWLATGRDLSRQKVRHTFVGTP 188
                   +S  K   TF GTP
Sbjct: 133 K-----EGISGDKTTKTFCGTP 149


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 52.8 bits (121), Expect = 6e-09
 Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 13/171 (7%)

Query: 114 GVFDEATIATVLKEVLKGLEYFHQNGQIHRDIKAGNILLGDDGTVQIADFGVSAWLATGR 173
           G F    +  +L+ +  G++Y  +   +HRD+ A N+L+      +IADFG+S  + +  
Sbjct: 730 GKFQVLQLVGMLRGIASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESAT 789

Query: 174 DLSRQKVRHTFVGTPCWMAPEVMEQNHGYDFKADIWSFGITAIE-MATGTAPYHKYPPMK 232
           +      R   +    W APE +     +   +D+WS GI   E M+ G  PY  +    
Sbjct: 790 E-GAYTTRGGKIPVR-WTAPEAIAFRK-FTSASDVWSMGIVCWEVMSYGERPYWNWSNQD 846

Query: 233 VLMLTLQNDPPTLDTGAEEKDQYKAYGKTFRKMISECLQKDPTKRPSAPEL 283
           V+         +++ G             ++ M+ +C QK+ T RP+   L
Sbjct: 847 VI--------KSIEKGYRLPAPMDCPEAIYQLML-DCWQKERTHRPTFANL 888


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 13/32 (40%), Positives = 15/32 (46%)

Query: 1   MATSGNSWPNSQDDYELMEVIGVGATAVVHAA 32
           +A   NSW N    YE +  IG G TA    A
Sbjct: 149 IANKINSWDNVVVAYEPVWAIGTGKTATPQQA 180


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 1/106 (0%)

Query: 225 YHKYPPMKVLMLTLQNDPPTLDTGAEEKDQYKAYGKTFRKMISECLQKDPTKRPSAPELL 284
           Y    PM   M T+   P T  +    +  +    K  R  +  CL+K     P  PE  
Sbjct: 24  YASTMPMPDDMRTVTKRPKTKKSQGS-RTTHNELEKNRRAHLRNCLEKLKVLVPLGPETS 82

Query: 285 KHSFFKKAKDRKYLVQTLVSNGPSMETRVHKASKRQPGASGRLHRM 330
           +H+        K  +++L            + S+ Q     RL ++
Sbjct: 83  RHTTLGLLTKAKRFIKSLEERERKHAVHKEQLSREQRFLRRRLEQL 128


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 13/47 (27%), Positives = 20/47 (42%)

Query: 293 KDRKYLVQTLVSNGPSMETRVHKASKRQPGASGRLHRMETGEWVWES 339
           K RK+ +    +N      R+H    R      R  R++TG + W S
Sbjct: 23  KKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRLDTGNFSWGS 69


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 7/25 (28%), Positives = 17/25 (68%)

Query: 254 QYKAYGKTFRKMISECLQKDPTKRP 278
           +Y+ YGKT ++   + ++++ +K P
Sbjct: 277 EYRKYGKTSKERSRDRMERERSKEP 301


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,460
Number of Sequences: 429
Number of extensions: 4592
Number of successful extensions: 37
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 11
length of query: 490
length of database: 140,377
effective HSP length: 60
effective length of query: 430
effective length of database: 114,637
effective search space: 49293910
effective search space used: 49293910
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)