Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003600-TA|BGIBMGA003600-PA|undefined
(102 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 0.74
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 0.74
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 3.0
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 4.0
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 4.0
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 19 9.1
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.0 bits (47), Expect = 0.74
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 31 WPCMAWYSMVWHGMAWYGMVWHGMAWYGMV 60
W ++VW + Y +W G+ W G V
Sbjct: 207 WELAGTLAVVW--IMCYFCIWKGVKWTGKV 234
Score = 22.6 bits (46), Expect = 0.98
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 38 SMVWHGMAWYGMVWHGMAWYGMVWPGMAWYGMV 70
S+ W +VW + Y +W G+ W G V
Sbjct: 204 SIRWELAGTLAVVW--IMCYFCIWKGVKWTGKV 234
Score = 22.2 bits (45), Expect = 1.3
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 21 WHGMAWYGMVWPCMAWYSMVWHGMAWYGMV 50
W +VW + Y +W G+ W G V
Sbjct: 207 WELAGTLAVVW--IMCYFCIWKGVKWTGKV 234
Score = 21.8 bits (44), Expect = 1.7
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 51 WHGMAWYGMVWPGMAWYGMVWHGMAWYGMV 80
W +VW + Y +W G+ W G V
Sbjct: 207 WELAGTLAVVW--IMCYFCIWKGVKWTGKV 234
Score = 20.2 bits (40), Expect = 5.2
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 7 YGKVWQGMAWYGMV 20
Y +W+G+ W G V
Sbjct: 221 YFCIWKGVKWTGKV 234
Score = 20.2 bits (40), Expect = 5.2
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 17 YGMVWHGMAWYGMV 30
Y +W G+ W G V
Sbjct: 221 YFCIWKGVKWTGKV 234
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 0.74
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 31 WPCMAWYSMVWHGMAWYGMVWHGMAWYGMV 60
W ++VW + Y +W G+ W G V
Sbjct: 260 WELAGTLAVVW--IMCYFCIWKGVKWTGKV 287
Score = 22.6 bits (46), Expect = 0.98
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 38 SMVWHGMAWYGMVWHGMAWYGMVWPGMAWYGMV 70
S+ W +VW + Y +W G+ W G V
Sbjct: 257 SIRWELAGTLAVVW--IMCYFCIWKGVKWTGKV 287
Score = 22.2 bits (45), Expect = 1.3
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 21 WHGMAWYGMVWPCMAWYSMVWHGMAWYGMV 50
W +VW + Y +W G+ W G V
Sbjct: 260 WELAGTLAVVW--IMCYFCIWKGVKWTGKV 287
Score = 21.8 bits (44), Expect = 1.7
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 51 WHGMAWYGMVWPGMAWYGMVWHGMAWYGMV 80
W +VW + Y +W G+ W G V
Sbjct: 260 WELAGTLAVVW--IMCYFCIWKGVKWTGKV 287
Score = 20.2 bits (40), Expect = 5.2
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 7 YGKVWQGMAWYGMV 20
Y +W+G+ W G V
Sbjct: 274 YFCIWKGVKWTGKV 287
Score = 20.2 bits (40), Expect = 5.2
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 17 YGMVWHGMAWYGMV 30
Y +W G+ W G V
Sbjct: 274 YFCIWKGVKWTGKV 287
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.0 bits (42), Expect = 3.0
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 26 WYGMVWPCMAWYSMVWHGMAWYGMVWHGM 54
W G C+ +V+ + W G + GM
Sbjct: 357 WSGFCSQCIWQEKIVFAAVTWLGWINSGM 385
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 20.6 bits (41), Expect = 4.0
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 13 GMAWYGMVWHGMAWYGMVWPC 33
G YG+V+ W G PC
Sbjct: 601 GRGQYGIVFACDGWGGKAGPC 621
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 20.6 bits (41), Expect = 4.0
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 13 GMAWYGMVWHGMAWYGMVWPC 33
G YG+V+ W G PC
Sbjct: 639 GRGQYGIVFACDGWGGKAGPC 659
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 19.4 bits (38), Expect = 9.1
Identities = 5/10 (50%), Positives = 7/10 (70%)
Query: 7 YGKVWQGMAW 16
Y + WQG+ W
Sbjct: 570 YWRYWQGVDW 579
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.330 0.140 0.640
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,700
Number of Sequences: 429
Number of extensions: 1291
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of query: 102
length of database: 140,377
effective HSP length: 49
effective length of query: 53
effective length of database: 119,356
effective search space: 6325868
effective search space used: 6325868
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.9 bits)
S2: 38 (19.4 bits)
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