GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003598-TA|BGIBMGA003598-PA|IPR003191|Guanylate-binding
protein
         (751 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    27   0.74 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    26   1.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   9.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   9.1  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 26.6 bits (56), Expect = 0.74
 Identities = 19/82 (23%), Positives = 34/82 (41%)

Query: 449 DLESVHNEAVEKTIEFFDSRRQKFADFEDQARVVLIENLKKKLTDLNHENEGNTRIFISE 508
           D E V +  +   +E FD R   F   +D+ +  +   L+ +  + +H      R   S 
Sbjct: 35  DYEVVESRELTNLVEIFDGRGTIFEGHDDREQPSVYPLLRFENPETHHPIRHGRRQSRSM 94

Query: 509 AVLTYSKAMETLLSKEYAVEDD 530
            +  + + M   + KE  VE D
Sbjct: 95  DLNAHREQMSWPVKKEAVVEGD 116


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 372 QAIEAAKALYNSKKKMGSADELVARLDNLVKELDEILPQTL 412
           Q++E   AL   + K    +E + +LD  +K  DE+L Q +
Sbjct: 359 QSVELKLALDQEQLKSKKLEESMRKLDEEMKRTDELLYQMI 399


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 351 NSKFGVDQLSAPTEAIRFSHSQAIEAAK 378
           NSK G D+LS P     +  S   +A K
Sbjct: 147 NSKIGRDELSQPGSLNGYGSSDGCDARK 174


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 417 TKVRKLNSEAQKIYADEVKK 436
           + +R+LNSEA +I  + V+K
Sbjct: 78  SSIRRLNSEAHRIRWESVQK 97


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.134    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,007
Number of Sequences: 429
Number of extensions: 8851
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 4
length of query: 751
length of database: 140,377
effective HSP length: 63
effective length of query: 688
effective length of database: 113,350
effective search space: 77984800
effective search space used: 77984800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)