GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003579-TA|BGIBMGA003579-PA|IPR008758|Peptidase S28
         (419 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            26   0.69 
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    24   2.1  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    24   2.1  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    24   2.1  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    24   2.1  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    24   2.1  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    24   2.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    24   2.1  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    23   6.4  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 25.8 bits (54), Expect = 0.69
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 4/52 (7%)

Query: 238 SKEEENVFYDTKNNCYDYEFDEMIQNTKEIDWLVSWTYQTCTEFSYFPSTSS 289
           SK E N         Y YE     +    + WLV+W  Q    + + PS  S
Sbjct: 254 SKREYNGIGAVIEFKYSYEISNAFRGNNNLKWLVNWGEQ----WGFLPSKDS 301


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
          determiner protein.
          Length = 174

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 54 YYGKSKPFEELTTENLKFLSSRQALADTARLLESVKSEPQYENS 97
          Y  K + +E+L  E  KFL  R +    +R  E  +   + ENS
Sbjct: 12 YRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENS 55


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
          determiner protein.
          Length = 174

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 54 YYGKSKPFEELTTENLKFLSSRQALADTARLLESVKSEPQYENS 97
          Y  K + +E+L  E  KFL  R +    +R  E  +   + ENS
Sbjct: 12 YRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENS 55


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
          determiner protein.
          Length = 174

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 54 YYGKSKPFEELTTENLKFLSSRQALADTARLLESVKSEPQYENS 97
          Y  K + +E+L  E  KFL  R +    +R  E  +   + ENS
Sbjct: 12 YRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENS 55


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
          determiner protein.
          Length = 174

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 54 YYGKSKPFEELTTENLKFLSSRQALADTARLLESVKSEPQYENS 97
          Y  K + +E+L  E  KFL  R +    +R  E  +   + ENS
Sbjct: 12 YRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENS 55


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
          determiner protein.
          Length = 174

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 54 YYGKSKPFEELTTENLKFLSSRQALADTARLLESVKSEPQYENS 97
          Y  K + +E+L  E  KFL  R +    +R  E  +   + ENS
Sbjct: 12 YRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENS 55


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
          determiner protein.
          Length = 174

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 54 YYGKSKPFEELTTENLKFLSSRQALADTARLLESVKSEPQYENS 97
          Y  K + +E+L  E  KFL  R +    +R  E  +   + ENS
Sbjct: 12 YRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENS 55


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 148 DFEQHGTEDCMKKINEIFT 166
           DF+   TEDC K  N++ T
Sbjct: 524 DFKIEVTEDCNKSFNDLLT 542


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 214 AQYGNADVIKTYCEDIKNT 232
           A + NA+ +K YCE  KN+
Sbjct: 55  AAHLNAEGMKKYCETYKNS 73


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.134    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,185
Number of Sequences: 429
Number of extensions: 5816
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 9
length of query: 419
length of database: 140,377
effective HSP length: 59
effective length of query: 360
effective length of database: 115,066
effective search space: 41423760
effective search space used: 41423760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)