GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003577-TA|BGIBMGA003577-PA|undefined
         (279 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   5.3  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.3  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 226 ASTEQTEEIAVNDYDATVPEDLPDDEVPLNE 256
           A  +  EE A    +  +P +LP+DE  L E
Sbjct: 137 AREDNDEEEAQKPKEQYIPPELPNDEKSLFE 167


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 110 PGIVKHRNSFRSLHRPDLK--RVPYLRRMKPDE 140
           P +  +  S   LHRPD K   VP L  + PD+
Sbjct: 122 PNLFIYALSVAILHRPDTKDLPVPPLTEVFPDK 154


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.131    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,185
Number of Sequences: 429
Number of extensions: 3005
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 2
length of query: 279
length of database: 140,377
effective HSP length: 57
effective length of query: 222
effective length of database: 115,924
effective search space: 25735128
effective search space used: 25735128
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 43 (21.4 bits)