Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003576-TA|BGIBMGA003576-PA|undefined
(172 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02081-1|AAB08847.1| 460|Homo sapiens guanine nucleotide regula... 32 0.90
BC053553-1|AAH53553.1| 596|Homo sapiens neuroepithelial cell tr... 32 0.90
BC010285-1|AAH10285.1| 542|Homo sapiens neuroepithelial cell tr... 32 0.90
AL732437-5|CAI11033.1| 596|Homo sapiens neuroepithelial cell tr... 32 0.90
AL732437-4|CAI11032.1| 160|Homo sapiens neuroepithelial cell tr... 32 0.90
AL732437-3|CAI11031.1| 542|Homo sapiens neuroepithelial cell tr... 32 0.90
AJ010046-1|CAA08974.1| 548|Homo sapiens guanine nucleotide-exch... 32 0.90
AB209852-1|BAD93089.1| 624|Homo sapiens Neuroepithelial cell tr... 32 0.90
U75370-1|AAB58255.1| 1230|Homo sapiens mitochondrial RNA polymer... 31 2.1
DQ301478-1|ABC01031.1| 493|Homo sapiens TRIM5 protein. 31 2.1
DQ301476-1|ABC01029.1| 493|Homo sapiens TRIM5 protein. 31 2.1
DQ301474-1|ABC01027.1| 493|Homo sapiens TRIM5 protein. 31 2.1
DQ301471-1|ABC01024.1| 493|Homo sapiens TRIM5 protein. 31 2.1
DQ301469-1|ABC01022.1| 493|Homo sapiens TRIM5 protein. 31 2.1
DQ301464-1|ABC01017.1| 493|Homo sapiens TRIM5 protein. 31 2.1
DQ301463-1|ABC01016.1| 493|Homo sapiens TRIM5 protein. 31 2.1
DQ301460-1|ABC01013.1| 493|Homo sapiens TRIM5 protein. 31 2.1
DQ301453-1|ABC01006.1| 493|Homo sapiens TRIM5 protein. 31 2.1
DQ301447-1|ABC01000.1| 493|Homo sapiens TRIM5 protein. 31 2.1
DQ301446-1|ABC00999.1| 493|Homo sapiens TRIM5 protein. 31 2.1
DQ301445-1|ABC00998.1| 493|Homo sapiens TRIM5 protein. 31 2.1
DQ301444-1|ABC00997.1| 493|Homo sapiens TRIM5 protein. 31 2.1
BC098387-1|AAH98387.1| 1230|Homo sapiens polymerase (RNA) mitoch... 31 2.1
AC004449-1|AAC06147.1| 1230|Homo sapiens RPOM_HUMAN protein. 31 2.1
AB209920-1|BAD93157.1| 1072|Homo sapiens DNA-directed RNA polyme... 31 2.1
DQ288685-1|ABB90543.1| 493|Homo sapiens TRIM5alpha protein. 31 2.7
AK097517-1|BAC05084.1| 621|Homo sapiens protein ( Homo sapiens ... 31 2.7
AF220028-1|AAG53482.1| 326|Homo sapiens tripartite motif protei... 31 2.7
AF220027-1|AAG53481.1| 347|Homo sapiens tripartite motif protei... 31 2.7
DQ301480-1|ABC01033.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301479-1|ABC01032.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301477-1|ABC01030.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301475-1|ABC01028.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301473-1|ABC01026.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301472-1|ABC01025.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301470-1|ABC01023.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301468-1|ABC01021.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301467-1|ABC01020.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301466-1|ABC01019.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301465-1|ABC01018.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301462-1|ABC01015.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301461-1|ABC01014.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301459-1|ABC01012.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301458-1|ABC01011.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301457-1|ABC01010.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301456-1|ABC01009.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301455-1|ABC01008.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301454-1|ABC01007.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301452-1|ABC01005.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301451-1|ABC01004.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301450-1|ABC01003.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301449-1|ABC01002.1| 493|Homo sapiens TRIM5 protein. 30 3.6
DQ301448-1|ABC01001.1| 493|Homo sapiens TRIM5 protein. 30 3.6
BC021258-1|AAH21258.1| 347|Homo sapiens tripartite motif-contai... 30 3.6
BC020770-1|AAH20770.1| 219|Homo sapiens Unknown (protein for IM... 30 3.6
AY625000-1|AAT48101.1| 493|Homo sapiens TRIM5 alpha protein. 30 3.6
AF220029-1|AAG53483.1| 271|Homo sapiens tripartite motif protei... 30 3.6
AF220026-1|AAG53480.1| 400|Homo sapiens tripartite motif protei... 30 3.6
AF220025-1|AAG53479.1| 493|Homo sapiens tripartite motif protei... 30 3.6
M99578-1|AAA36187.1| 550|Homo sapiens protein ( Human lymphocyt... 29 6.4
L03426-2|AAA61303.1| 385|Homo sapiens XE7 protein. 29 6.4
L03426-1|AAA61304.1| 695|Homo sapiens XE7 protein. 29 6.4
BC110497-1|AAI10498.1| 695|Homo sapiens chromosome X and Y open... 29 6.4
BC110496-1|AAI10497.1| 695|Homo sapiens chromosome X and Y open... 29 6.4
BC028151-1|AAH28151.1| 446|Homo sapiens CXYorf3 protein protein. 29 6.4
BC005140-1|AAH05140.1| 576|Homo sapiens PRC1 protein protein. 29 6.4
AL683807-2|CAI41501.1| 695|Homo sapiens chromosome X and Y open... 29 6.4
AL683807-1|CAI41499.1| 446|Homo sapiens chromosome X and Y open... 29 6.4
AK131085-1|BAC85135.1| 576|Homo sapiens FLJ00286 protein protein. 29 6.4
AK131084-1|BAC85134.1| 829|Homo sapiens FLJ00285 protein protein. 29 6.4
AF132984-1|AAD34394.1| 350|Homo sapiens nuclear pore complex in... 29 6.4
AC002045-2|AAC05437.1| 232|Homo sapiens Unknown protein product... 29 6.4
AC002045-1|AAC05438.1| 350|Homo sapiens Unknown protein product... 29 6.4
AB075516-1|BAE45761.1| 158|Homo sapiens putative protein produc... 29 6.4
Z98949-1|CAI17892.1| 2566|Homo sapiens protein ( Human DNA seque... 29 8.4
BC023569-1|AAH23569.1| 443|Homo sapiens UPF3 regulator of nonse... 29 8.4
BC018026-1|AAH18026.1| 158|Homo sapiens complexin 3 protein. 29 8.4
AY286501-1|AAP41127.1| 158|Homo sapiens complexin III protein. 29 8.4
AY077700-1|AAL75811.1| 2568|Homo sapiens myosin-like protein pro... 29 8.4
AY013250-1|AAG48510.1| 476|Homo sapiens hUPF3A protein. 29 8.4
AL160396-6|CAI15816.1| 476|Homo sapiens UPF3 regulator of nonse... 29 8.4
AL160396-5|CAM22288.1| 443|Homo sapiens UPF3 regulator of nonse... 29 8.4
AL080245-1|CAI16965.1| 2566|Homo sapiens protein ( Human DNA seq... 29 8.4
AL079300-1|CAI17881.1| 2566|Homo sapiens protein ( Human DNA seq... 29 8.4
AL022329-3|CAI17968.1| 2566|Homo sapiens protein ( Human DNA seq... 29 8.4
AK074096-1|BAB84922.1| 181|Homo sapiens FLJ00167 protein protein. 29 8.4
AK027593-1|BAB55218.1| 493|Homo sapiens protein ( Homo sapiens ... 29 8.4
AK024055-1|BAB14805.1| 158|Homo sapiens protein ( Homo sapiens ... 29 8.4
AJ310932-1|CAC70714.3| 2567|Homo sapiens myosin heavy chain prot... 29 8.4
AJ310931-1|CAC70712.2| 2567|Homo sapiens myosin heavy chain prot... 29 8.4
AF318575-1|AAG60690.1| 452|Homo sapiens UPF3 protein. 29 8.4
AB075376-1|BAC16363.1| 2567|Homo sapiens bk125H2.1 protein. 29 8.4
AB072900-1|BAE45711.1| 158|Homo sapiens putative protein produc... 29 8.4
AB042648-1|BAB55550.2| 2080|Homo sapiens bk125H2.1 protein. 29 8.4
>U02081-1|AAB08847.1| 460|Homo sapiens guanine nucleotide
regulatory protein protein.
Length = 460
Score = 32.3 bits (70), Expect = 0.90
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 59 YVPMHDPHLAHHFAQKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEI 118
Y+P+H+ L ++ +G V L N YR Y NQ + ++
Sbjct: 83 YIPLHEDLLTRIGEATKPDGTVEQIGHIL-----VSWLPRLNAYRGYCSNQLAAKALLDQ 137
Query: 119 KKMDERARDDLTLKRVETDVARRLQIFTKAEKAREHLEK 157
KK D R +D L + +E+ +R+L +++ + R L K
Sbjct: 138 KKQDPRVQDFLQ-RCLESPFSRKLDLWSFLDIPRSRLVK 175
>BC053553-1|AAH53553.1| 596|Homo sapiens neuroepithelial cell
transforming gene 1 protein.
Length = 596
Score = 32.3 bits (70), Expect = 0.90
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 59 YVPMHDPHLAHHFAQKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEI 118
Y+P+H+ L ++ +G V L N YR Y NQ + ++
Sbjct: 225 YIPLHEDLLTRIGEATKPDGTVEQIGHIL-----VSWLPRLNAYRGYCSNQLAAKALLDQ 279
Query: 119 KKMDERARDDLTLKRVETDVARRLQIFTKAEKAREHLEK 157
KK D R +D L + +E+ +R+L +++ + R L K
Sbjct: 280 KKQDPRVQDFLQ-RCLESPFSRKLDLWSFLDIPRSRLVK 317
>BC010285-1|AAH10285.1| 542|Homo sapiens neuroepithelial cell
transforming gene 1 protein.
Length = 542
Score = 32.3 bits (70), Expect = 0.90
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 59 YVPMHDPHLAHHFAQKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEI 118
Y+P+H+ L ++ +G V L N YR Y NQ + ++
Sbjct: 171 YIPLHEDLLTRIGEATKPDGTVEQIGHIL-----VSWLPRLNAYRGYCSNQLAAKALLDQ 225
Query: 119 KKMDERARDDLTLKRVETDVARRLQIFTKAEKAREHLEK 157
KK D R +D L + +E+ +R+L +++ + R L K
Sbjct: 226 KKQDPRVQDFLQ-RCLESPFSRKLDLWSFLDIPRSRLVK 263
>AL732437-5|CAI11033.1| 596|Homo sapiens neuroepithelial cell
transforming gene 1 protein.
Length = 596
Score = 32.3 bits (70), Expect = 0.90
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 59 YVPMHDPHLAHHFAQKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEI 118
Y+P+H+ L ++ +G V L N YR Y NQ + ++
Sbjct: 225 YIPLHEDLLTRIGEATKPDGTVEQIGHIL-----VSWLPRLNAYRGYCSNQLAAKALLDQ 279
Query: 119 KKMDERARDDLTLKRVETDVARRLQIFTKAEKAREHLEK 157
KK D R +D L + +E+ +R+L +++ + R L K
Sbjct: 280 KKQDPRVQDFLQ-RCLESPFSRKLDLWSFLDIPRSRLVK 317
>AL732437-4|CAI11032.1| 160|Homo sapiens neuroepithelial cell
transforming gene 1 protein.
Length = 160
Score = 32.3 bits (70), Expect = 0.90
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 59 YVPMHDPHLAHHFAQKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEI 118
Y+P+H+ L ++ +G V L N YR Y NQ + ++
Sbjct: 43 YIPLHEDLLTRIGEATKPDGTVEQIGHIL-----VSWLPRLNAYRGYCSNQLAAKALLDQ 97
Query: 119 KKMDERARDDLTLKRVETDVARRLQIFTKAEKAREHLEK 157
KK D R +D L + +E+ +R+L +++ + R L K
Sbjct: 98 KKQDPRVQDFLQ-RCLESPFSRKLDLWSFLDIPRSRLVK 135
>AL732437-3|CAI11031.1| 542|Homo sapiens neuroepithelial cell
transforming gene 1 protein.
Length = 542
Score = 32.3 bits (70), Expect = 0.90
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 59 YVPMHDPHLAHHFAQKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEI 118
Y+P+H+ L ++ +G V L N YR Y NQ + ++
Sbjct: 171 YIPLHEDLLTRIGEATKPDGTVEQIGHIL-----VSWLPRLNAYRGYCSNQLAAKALLDQ 225
Query: 119 KKMDERARDDLTLKRVETDVARRLQIFTKAEKAREHLEK 157
KK D R +D L + +E+ +R+L +++ + R L K
Sbjct: 226 KKQDPRVQDFLQ-RCLESPFSRKLDLWSFLDIPRSRLVK 263
>AJ010046-1|CAA08974.1| 548|Homo sapiens guanine
nucleotide-exchange factor protein.
Length = 548
Score = 32.3 bits (70), Expect = 0.90
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 59 YVPMHDPHLAHHFAQKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEI 118
Y+P+H+ L ++ +G V L N YR Y NQ + ++
Sbjct: 171 YIPLHEDLLTRIGEATKPDGTVEQIGHIL-----VSWLPRLNAYRGYCSNQLAAKALLDQ 225
Query: 119 KKMDERARDDLTLKRVETDVARRLQIFTKAEKAREHLEK 157
KK D R +D L + +E+ +R+L +++ + R L K
Sbjct: 226 KKQDPRVQDFLQ-RCLESPFSRKLDLWSFLDIPRSRLVK 263
>AB209852-1|BAD93089.1| 624|Homo sapiens Neuroepithelial cell
transforming gene 1 protein variant protein.
Length = 624
Score = 32.3 bits (70), Expect = 0.90
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 59 YVPMHDPHLAHHFAQKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEI 118
Y+P+H+ L ++ +G V L N YR Y NQ + ++
Sbjct: 254 YIPLHEDLLTRIGEATKPDGTVEQIGHIL-----VSWLPRLNAYRGYCSNQLAAKALLDQ 308
Query: 119 KKMDERARDDLTLKRVETDVARRLQIFTKAEKAREHLEK 157
KK D R +D L + +E+ +R+L +++ + R L K
Sbjct: 309 KKQDPRVQDFLQ-RCLESPFSRKLDLWSFLDIPRSRLVK 346
>U75370-1|AAB58255.1| 1230|Homo sapiens mitochondrial RNA polymerase
protein.
Length = 1230
Score = 31.1 bits (67), Expect = 2.1
Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 3/94 (3%)
Query: 64 DPHLAHHFAQKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDE 123
+ HL H A + L C K R + SLR YR L DR+ MD
Sbjct: 743 EAHLPHSAAPARKAELRRELAHCQKVAREMHSLRAEALYRLSLAQHLRDRVFWLPHNMDF 802
Query: 124 RARD---DLTLKRVETDVARRLQIFTKAEKAREH 154
R R + +DVAR L F + H
Sbjct: 803 RGRTYPCPPHFNHLGSDVARALLEFAQGRPLGPH 836
>DQ301478-1|ABC01031.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAXEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301476-1|ABC01029.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAXEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301474-1|ABC01027.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAXEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301471-1|ABC01024.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAXEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301469-1|ABC01022.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKXICWLCERSQEHRGHHTFLTEEVAXEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301464-1|ABC01017.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAXEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301463-1|ABC01016.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAXEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301460-1|ABC01013.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAXEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301453-1|ABC01006.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAXEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301447-1|ABC01000.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAXEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301446-1|ABC00999.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAXEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301445-1|ABC00998.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAXEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301444-1|ABC00997.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAXEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>BC098387-1|AAH98387.1| 1230|Homo sapiens polymerase (RNA)
mitochondrial (DNA directed) protein.
Length = 1230
Score = 31.1 bits (67), Expect = 2.1
Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 3/94 (3%)
Query: 64 DPHLAHHFAQKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDE 123
+ HL H A + L C K R + SLR YR L DR+ MD
Sbjct: 743 EAHLPHSAAPARKAELRRELAHCQKVAREMHSLRAEALYRLSLAQHLRDRVFWLPHNMDF 802
Query: 124 RARD---DLTLKRVETDVARRLQIFTKAEKAREH 154
R R + +DVAR L F + H
Sbjct: 803 RGRTYPCPPHFNHLGSDVARALLEFAQGRPLGPH 836
>AC004449-1|AAC06147.1| 1230|Homo sapiens RPOM_HUMAN protein.
Length = 1230
Score = 31.1 bits (67), Expect = 2.1
Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 3/94 (3%)
Query: 64 DPHLAHHFAQKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDE 123
+ HL H A + L C K R + SLR YR L DR+ MD
Sbjct: 743 EAHLPHSAAPARKAELRRELAHCQKVAREMHSLRAEALYRLSLAQHLRDRVFWLPHNMDF 802
Query: 124 RARD---DLTLKRVETDVARRLQIFTKAEKAREH 154
R R + +DVAR L F + H
Sbjct: 803 RGRTYPCPPHFNHLGSDVARALLEFAQGRPLGPH 836
>AB209920-1|BAD93157.1| 1072|Homo sapiens DNA-directed RNA
polymerase variant protein.
Length = 1072
Score = 31.1 bits (67), Expect = 2.1
Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 3/94 (3%)
Query: 64 DPHLAHHFAQKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDE 123
+ HL H A + L C K R + SLR YR L DR+ MD
Sbjct: 585 EAHLPHSAAPARKAELRRELAHCQKVAREMHSLRAEALYRLSLAQHLRDRVFWLPHNMDF 644
Query: 124 RARD---DLTLKRVETDVARRLQIFTKAEKAREH 154
R R + +DVAR L F + H
Sbjct: 645 RGRTYPCPPHFNHLGSDVARALLEFAQGRPLGPH 678
>DQ288685-1|ABB90543.1| 493|Homo sapiens TRIM5alpha protein.
Length = 493
Score = 30.7 bits (66), Expect = 2.7
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAQEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>AK097517-1|BAC05084.1| 621|Homo sapiens protein ( Homo sapiens
cDNA FLJ40198 fis, clone TESTI2019975, weakly similar to
TRICHOHYALIN. ).
Length = 621
Score = 30.7 bits (66), Expect = 2.7
Identities = 10/56 (17%), Positives = 33/56 (58%)
Query: 117 EIKKMDERARDDLTLKRVETDVARRLQIFTKAEKAREHLEKVAQEHADEWAEKKRL 172
+I++ +E+ +++ ++ E + +++ + EK RE EK+ ++ W +++++
Sbjct: 385 KIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEKKMWRQEEKI 440
>AF220028-1|AAG53482.1| 326|Homo sapiens tripartite motif protein
TRIM5 isoform delta protein.
Length = 326
Score = 30.7 bits (66), Expect = 2.7
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAQEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>AF220027-1|AAG53481.1| 347|Homo sapiens tripartite motif protein
TRIM5 isoform gamma protein.
Length = 347
Score = 30.7 bits (66), Expect = 2.7
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAQEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301480-1|ABC01033.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301479-1|ABC01032.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKXICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301477-1|ABC01030.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301475-1|ABC01028.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301473-1|ABC01026.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301472-1|ABC01025.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKXICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301470-1|ABC01023.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301468-1|ABC01021.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301467-1|ABC01020.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301466-1|ABC01019.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKXICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301465-1|ABC01018.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301462-1|ABC01015.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKXICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301461-1|ABC01014.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301459-1|ABC01012.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301458-1|ABC01011.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301457-1|ABC01010.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301456-1|ABC01009.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301455-1|ABC01008.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301454-1|ABC01007.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301452-1|ABC01005.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301451-1|ABC01004.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301450-1|ABC01003.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301449-1|ABC01002.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>DQ301448-1|ABC01001.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>BC021258-1|AAH21258.1| 347|Homo sapiens tripartite
motif-containing 5 protein.
Length = 347
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>BC020770-1|AAH20770.1| 219|Homo sapiens Unknown (protein for
IMAGE:4733445) protein.
Length = 219
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>AY625000-1|AAT48101.1| 493|Homo sapiens TRIM5 alpha protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>AF220029-1|AAG53483.1| 271|Homo sapiens tripartite motif protein
TRIM5 isoform epsilon protein.
Length = 271
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>AF220026-1|AAG53480.1| 400|Homo sapiens tripartite motif protein
TRIM5 isoform beta protein.
Length = 400
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>AF220025-1|AAG53479.1| 493|Homo sapiens tripartite motif protein
TRIM5 isoform alpha protein.
Length = 493
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>M99578-1|AAA36187.1| 550|Homo sapiens protein ( Human lymphocyte
surface protein exons 1-5, complete cds. ).
Length = 550
Score = 29.5 bits (63), Expect = 6.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 75 SARNRMKFLGFCTKDGRAV-CSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKR 133
SA MK + + +DG+AV C+++ K+L + + + +E +K+ E + KR
Sbjct: 232 SALRGMKLM-YKGEDGKAVACNIKVSFDSTKHLSDASIKKRQLERQKLQELEQQREEQKR 290
Query: 134 VETDVARRLQIFTKAEKAREHLEK 157
E + R + + +K E LE+
Sbjct: 291 REKEAEERQRAEERKQKELEELER 314
>L03426-2|AAA61303.1| 385|Homo sapiens XE7 protein.
Length = 385
Score = 29.5 bits (63), Expect = 6.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 75 SARNRMKFLGFCTKDGRAV-CSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKR 133
SA MK + + +DG+AV C+++ K+L + + + +E +K+ E + KR
Sbjct: 232 SALRGMKLM-YKGEDGKAVACNIKVSFDSTKHLSDASIKKRQLERQKLQELEQQREEQKR 290
Query: 134 VETDVARRLQIFTKAEKAREHLEK 157
E + R + + +K E LE+
Sbjct: 291 REKEAEERQRAEERKQKELEELER 314
>L03426-1|AAA61304.1| 695|Homo sapiens XE7 protein.
Length = 695
Score = 29.5 bits (63), Expect = 6.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 75 SARNRMKFLGFCTKDGRAV-CSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKR 133
SA MK + + +DG+AV C+++ K+L + + + +E +K+ E + KR
Sbjct: 232 SALRGMKLM-YKGEDGKAVACNIKVSFDSTKHLSDASIKKRQLERQKLQELEQQREEQKR 290
Query: 134 VETDVARRLQIFTKAEKAREHLEK 157
E + R + + +K E LE+
Sbjct: 291 REKEAEERQRAEERKQKELEELER 314
>BC110497-1|AAI10498.1| 695|Homo sapiens chromosome X and Y open
reading frame 3 protein.
Length = 695
Score = 29.5 bits (63), Expect = 6.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 75 SARNRMKFLGFCTKDGRAV-CSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKR 133
SA MK + + +DG+AV C+++ K+L + + + +E +K+ E + KR
Sbjct: 232 SALRGMKLM-YKGEDGKAVACNIKVSFDSTKHLSDASIKKRQLERQKLQELEQQREEQKR 290
Query: 134 VETDVARRLQIFTKAEKAREHLEK 157
E + R + + +K E LE+
Sbjct: 291 REKEAEERQRAEERKQKELEELER 314
>BC110496-1|AAI10497.1| 695|Homo sapiens chromosome X and Y open
reading frame 3 protein.
Length = 695
Score = 29.5 bits (63), Expect = 6.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 75 SARNRMKFLGFCTKDGRAV-CSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKR 133
SA MK + + +DG+AV C+++ K+L + + + +E +K+ E + KR
Sbjct: 232 SALRGMKLM-YKGEDGKAVACNIKVSFDSTKHLSDASIKKRQLERQKLQELEQQREEQKR 290
Query: 134 VETDVARRLQIFTKAEKAREHLEK 157
E + R + + +K E LE+
Sbjct: 291 REKEAEERQRAEERKQKELEELER 314
>BC028151-1|AAH28151.1| 446|Homo sapiens CXYorf3 protein protein.
Length = 446
Score = 29.5 bits (63), Expect = 6.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 75 SARNRMKFLGFCTKDGRAV-CSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKR 133
SA MK + + +DG+AV C+++ K+L + + + +E +K+ E + KR
Sbjct: 232 SALRGMKLM-YKGEDGKAVACNIKVSFDSTKHLSDASIKKRQLERQKLQELEQQREEQKR 290
Query: 134 VETDVARRLQIFTKAEKAREHLEK 157
E + R + + +K E LE+
Sbjct: 291 REKEAEERQRAEERKQKELEELER 314
>BC005140-1|AAH05140.1| 576|Homo sapiens PRC1 protein protein.
Length = 576
Score = 29.5 bits (63), Expect = 6.4
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 75 SARNRMKFLGFCTKD-GRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKR 133
S R F FC +D ++ L + R Y + + ++K +E R L +R
Sbjct: 311 SQEQRQAFAPFCAEDYTESLLQLHDAEIVRLKNYYEVHKELFEGVQKWEETWRLFLEFER 370
Query: 134 VETDVAR---RLQIFTKAEKAREHLEKVAQEHADEWAEKKRL 172
+D R R K EK R L+K + A++W E RL
Sbjct: 371 KASDPNRFTNRGGNLLKEEKQRAKLQKFMEYVAEQW-EMHRL 411
>AL683807-2|CAI41501.1| 695|Homo sapiens chromosome X and Y open
reading frame 3 protein.
Length = 695
Score = 29.5 bits (63), Expect = 6.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 75 SARNRMKFLGFCTKDGRAV-CSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKR 133
SA MK + + +DG+AV C+++ K+L + + + +E +K+ E + KR
Sbjct: 232 SALRGMKLM-YKGEDGKAVACNIKVSFDSTKHLSDASIKKRQLERQKLQELEQQREEQKR 290
Query: 134 VETDVARRLQIFTKAEKAREHLEK 157
E + R + + +K E LE+
Sbjct: 291 REKEAEERQRAEERKQKELEELER 314
>AL683807-1|CAI41499.1| 446|Homo sapiens chromosome X and Y open
reading frame 3 protein.
Length = 446
Score = 29.5 bits (63), Expect = 6.4
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 75 SARNRMKFLGFCTKDGRAV-CSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKR 133
SA MK + + +DG+AV C+++ K+L + + + +E +K+ E + KR
Sbjct: 232 SALRGMKLM-YKGEDGKAVACNIKVSFDSTKHLSDASIKKRQLERQKLQELEQQREEQKR 290
Query: 134 VETDVARRLQIFTKAEKAREHLEK 157
E + R + + +K E LE+
Sbjct: 291 REKEAEERQRAEERKQKELEELER 314
>AK131085-1|BAC85135.1| 576|Homo sapiens FLJ00286 protein protein.
Length = 576
Score = 29.5 bits (63), Expect = 6.4
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 97 REFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVETDVARRLQIFTKAEKAREHLE 156
R N+ R+ ++ I ++++ + R + +V T V R +I K + A+EHL
Sbjct: 433 RRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLR 492
Query: 157 KVAQEHADEWAEKKR 171
K++ + E EK+R
Sbjct: 493 KLSMKER-EHGEKER 506
>AK131084-1|BAC85134.1| 829|Homo sapiens FLJ00285 protein protein.
Length = 829
Score = 29.5 bits (63), Expect = 6.4
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 97 REFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVETDVARRLQIFTKAEKAREHLE 156
R N+ R+ ++ I ++++ + R + +V T V R +I K + A+EHL
Sbjct: 686 RRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKKKTAKEHLR 745
Query: 157 KVAQEHADEWAEKKR 171
K++ + E EK+R
Sbjct: 746 KLSMKER-EHGEKER 759
>AF132984-1|AAD34394.1| 350|Homo sapiens nuclear pore complex
interacting protein NPIP protein.
Length = 350
Score = 29.5 bits (63), Expect = 6.4
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 97 REFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVETDVARRLQIFTKAEKAREHLE 156
R N+ R+ ++ I ++++ + R + +V T V R +I K + A+EHL
Sbjct: 89 RRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLR 148
Query: 157 KVAQEHADEWAEKKR 171
K++ + E EK+R
Sbjct: 149 KLSMKER-EHGEKER 162
>AC002045-2|AAC05437.1| 232|Homo sapiens Unknown protein product
CIT987SK-A-589H1_1 splice form 2 protein.
Length = 232
Score = 29.5 bits (63), Expect = 6.4
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 97 REFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVETDVARRLQIFTKAEKAREHLE 156
R N+ R+ ++ I ++++ + R + +V T V R +I K + A+EHL
Sbjct: 89 RRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLR 148
Query: 157 KVAQEHADEWAEKKR 171
K++ + E EK+R
Sbjct: 149 KLSMKER-EHGEKER 162
>AC002045-1|AAC05438.1| 350|Homo sapiens Unknown protein product
CIT987SK-A-589H1_1 splice form 1 protein.
Length = 350
Score = 29.5 bits (63), Expect = 6.4
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 97 REFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVETDVARRLQIFTKAEKAREHLE 156
R N+ R+ ++ I ++++ + R + +V T V R +I K + A+EHL
Sbjct: 89 RRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLR 148
Query: 157 KVAQEHADEWAEKKR 171
K++ + E EK+R
Sbjct: 149 KLSMKER-EHGEKER 162
>AB075516-1|BAE45761.1| 158|Homo sapiens putative protein product
of Nbla00537 protein.
Length = 158
Score = 29.5 bits (63), Expect = 6.4
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 97 REFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVETDVARRLQIFTKAEKAREHLE 156
R N+ R+ ++ I ++++ + R + +V T V R +I K + A+EHL
Sbjct: 65 RRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLR 124
Query: 157 KVAQEHADEWAEKKR 171
K++ + E EK+R
Sbjct: 125 KLSMKER-EHGEKER 138
>Z98949-1|CAI17892.1| 2566|Homo sapiens protein ( Human DNA sequence
from clone CTA-125H2 on chromosome 22q11-12. ).
Length = 2566
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 122 DERARDDLTLKRVETDVARRLQIFTKAEKAREHLEKVAQEHAD 164
DER + D+ + +E++ A RLQ F + ++ + E+V ++ D
Sbjct: 1448 DERFKGDVACQVLESERAERLQAFREVQELKSKHEQVQKKLGD 1490
>BC023569-1|AAH23569.1| 443|Homo sapiens UPF3 regulator of nonsense
transcripts homolog A (yeast) protein.
Length = 443
Score = 29.1 bits (62), Expect = 8.4
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 73 QKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLK 132
+K++ N LG R + + R +Y+ N+ +++ + +K +ER R +L K
Sbjct: 156 EKTSANPETLLGEMEAKTRELIA-RRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKK 214
Query: 133 RVETDVARRLQIFTKAEKAREHLEKVAQE 161
R+ + RR + + +K +K E
Sbjct: 215 RLREEEKRRRREEERCKKKETDKQKKIAE 243
>BC018026-1|AAH18026.1| 158|Homo sapiens complexin 3 protein.
Length = 158
Score = 29.1 bits (62), Expect = 8.4
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 95 SLREFNQYRKYLYNQFMDRIHVEIKKMDERA------RDDLTLKRVETDVARRLQIFTKA 148
S E+ +Y+K L + M+R ++ ERA RD L + ETD ++
Sbjct: 40 SREEYEEYQKQLVEEKMERDAQFTQRKAERATLRSHFRDKYRLPKNETDESQIQMAGGDV 99
Query: 149 EKAREHLEKVAQEHADEWAEK 169
E RE L K+ +E +E EK
Sbjct: 100 ELPRE-LAKMIEEDTEEEEEK 119
>AY286501-1|AAP41127.1| 158|Homo sapiens complexin III protein.
Length = 158
Score = 29.1 bits (62), Expect = 8.4
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 95 SLREFNQYRKYLYNQFMDRIHVEIKKMDERA------RDDLTLKRVETDVARRLQIFTKA 148
S E+ +Y+K L + M+R ++ ERA RD L + ETD ++
Sbjct: 40 SREEYEEYQKQLVEEKMERDAQFTQRKAERATLRSHFRDKYRLPKNETDESQIQMAGGDV 99
Query: 149 EKAREHLEKVAQEHADEWAEK 169
E RE L K+ +E +E EK
Sbjct: 100 ELPRE-LAKMIEEDTEEEEEK 119
>AY077700-1|AAL75811.1| 2568|Homo sapiens myosin-like protein protein.
Length = 2568
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 122 DERARDDLTLKRVETDVARRLQIFTKAEKAREHLEKVAQEHAD 164
DER + D+ + +E++ A RLQ F + ++ + E+V ++ D
Sbjct: 1449 DERFKGDVACQVLESERAERLQAFREVQELKSKHEQVQKKLGD 1491
>AY013250-1|AAG48510.1| 476|Homo sapiens hUPF3A protein.
Length = 476
Score = 29.1 bits (62), Expect = 8.4
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 73 QKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLK 132
+K++ N LG R + + R +Y+ N+ +++ + +K +ER R +L K
Sbjct: 189 EKTSANPETLLGEMEAKTRELIA-RRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKK 247
Query: 133 RVETDVARRLQIFTKAEKAREHLEKVAQE 161
R+ + RR + + +K +K E
Sbjct: 248 RLREEEKRRRREEERCKKKETDKQKKIAE 276
>AL160396-6|CAI15816.1| 476|Homo sapiens UPF3 regulator of nonsense
transcripts homolog A (yeast) protein.
Length = 476
Score = 29.1 bits (62), Expect = 8.4
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 73 QKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLK 132
+K++ N LG R + + R +Y+ N+ +++ + +K +ER R +L K
Sbjct: 189 EKTSANPETLLGEMEAKTRELIA-RRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKK 247
Query: 133 RVETDVARRLQIFTKAEKAREHLEKVAQE 161
R+ + RR + + +K +K E
Sbjct: 248 RLREEEKRRRREEERCKKKETDKQKKIAE 276
>AL160396-5|CAM22288.1| 443|Homo sapiens UPF3 regulator of nonsense
transcripts homolog A (yeast) protein.
Length = 443
Score = 29.1 bits (62), Expect = 8.4
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 73 QKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLK 132
+K++ N LG R + + R +Y+ N+ +++ + +K +ER R +L K
Sbjct: 156 EKTSANPETLLGEMEAKTRELIA-RRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKK 214
Query: 133 RVETDVARRLQIFTKAEKAREHLEKVAQE 161
R+ + RR + + +K +K E
Sbjct: 215 RLREEEKRRRREEERCKKKETDKQKKIAE 243
>AL080245-1|CAI16965.1| 2566|Homo sapiens protein ( Human DNA sequence
from clone RP11-89B2 on chromosome 22. ).
Length = 2566
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 122 DERARDDLTLKRVETDVARRLQIFTKAEKAREHLEKVAQEHAD 164
DER + D+ + +E++ A RLQ F + ++ + E+V ++ D
Sbjct: 1448 DERFKGDVACQVLESERAERLQAFREVQELKSKHEQVQKKLGD 1490
>AL079300-1|CAI17881.1| 2566|Homo sapiens protein ( Human DNA sequence
from clone CTA-109D1 on chromosome 22. ).
Length = 2566
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 122 DERARDDLTLKRVETDVARRLQIFTKAEKAREHLEKVAQEHAD 164
DER + D+ + +E++ A RLQ F + ++ + E+V ++ D
Sbjct: 1448 DERFKGDVACQVLESERAERLQAFREVQELKSKHEQVQKKLGD 1490
>AL022329-3|CAI17968.1| 2566|Homo sapiens protein ( Human DNA sequence
from clone CTA-407F11 on chromosome 22q12. ).
Length = 2566
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 122 DERARDDLTLKRVETDVARRLQIFTKAEKAREHLEKVAQEHAD 164
DER + D+ + +E++ A RLQ F + ++ + E+V ++ D
Sbjct: 1448 DERFKGDVACQVLESERAERLQAFREVQELKSKHEQVQKKLGD 1490
>AK074096-1|BAB84922.1| 181|Homo sapiens FLJ00167 protein protein.
Length = 181
Score = 29.1 bits (62), Expect = 8.4
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 95 SLREFNQYRKYLYNQFMDRIHVEIKKMDERA------RDDLTLKRVETDVARRLQIFTKA 148
S E+ +Y+K L + M+R ++ ERA RD L + ETD ++
Sbjct: 63 SREEYEEYQKQLVEEKMERDAQFTQRKAERATLRSHFRDKYRLPKNETDESQIQMAGGDV 122
Query: 149 EKAREHLEKVAQEHADEWAEK 169
E RE L K+ +E +E EK
Sbjct: 123 ELPRE-LAKMIEEDTEEEEEK 142
>AK027593-1|BAB55218.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ14687 fis, clone NT2RP2005003, weakly similar to
52 KD RO PROTEIN. ).
Length = 493
Score = 29.1 bits (62), Expect = 8.4
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 76 ARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLKRVE 135
AR+ K L FC +DG+ +C L E +Q + + + + E + + A + L K+ E
Sbjct: 96 ARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFPTEEVAQEYQVKLQAALEMLRQKQQE 155
Query: 136 TDVARRLQIFTKAEKA 151
A L+ + EKA
Sbjct: 156 ---AEELEADIREEKA 168
>AK024055-1|BAB14805.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ13993 fis, clone Y79AA1002204, weakly similar to
COMPLEXIN 2. ).
Length = 158
Score = 29.1 bits (62), Expect = 8.4
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 95 SLREFNQYRKYLYNQFMDRIHVEIKKMDERA------RDDLTLKRVETDVARRLQIFTKA 148
S E+ +Y+K L + M+R ++ ERA RD L + ETD ++
Sbjct: 40 SREEYEEYQKQLVEEKMERDAQFTQRKAERATLRSHFRDKYRLPKNETDESQIQMAGGDV 99
Query: 149 EKAREHLEKVAQEHADEWAEK 169
E RE L K+ +E +E EK
Sbjct: 100 ELPRE-LAKMIEEDTEEEEEK 119
>AJ310932-1|CAC70714.3| 2567|Homo sapiens myosin heavy chain protein.
Length = 2567
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 122 DERARDDLTLKRVETDVARRLQIFTKAEKAREHLEKVAQEHAD 164
DER + D+ + +E++ A RLQ F + ++ + E+V ++ D
Sbjct: 1448 DERFKGDVACQVLESERAERLQAFREVQELKSKHEQVQKKLGD 1490
>AJ310931-1|CAC70712.2| 2567|Homo sapiens myosin heavy chain protein.
Length = 2567
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 122 DERARDDLTLKRVETDVARRLQIFTKAEKAREHLEKVAQEHAD 164
DER + D+ + +E++ A RLQ F + ++ + E+V ++ D
Sbjct: 1448 DERFKGDVACQVLESERAERLQAFREVQELKSKHEQVQKKLGD 1490
>AF318575-1|AAG60690.1| 452|Homo sapiens UPF3 protein.
Length = 452
Score = 29.1 bits (62), Expect = 8.4
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 73 QKSARNRMKFLGFCTKDGRAVCSLREFNQYRKYLYNQFMDRIHVEIKKMDERARDDLTLK 132
+K++ N LG R + + R +Y+ N+ +++ + +K +ER R +L K
Sbjct: 165 EKTSANPETLLGEMEAKTRELIA-RRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKK 223
Query: 133 RVETDVARRLQIFTKAEKAREHLEKVAQE 161
R+ + RR + + +K +K E
Sbjct: 224 RLREEEKRRRREEERCKKKETDKQKKIAE 252
>AB075376-1|BAC16363.1| 2567|Homo sapiens bk125H2.1 protein.
Length = 2567
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 122 DERARDDLTLKRVETDVARRLQIFTKAEKAREHLEKVAQEHAD 164
DER + D+ + +E++ A RLQ F + ++ + E+V ++ D
Sbjct: 1448 DERFKGDVACQVLESERAERLQAFREVQELKSKHEQVQKKLGD 1490
>AB072900-1|BAE45711.1| 158|Homo sapiens putative protein product
of Nbla11589 protein.
Length = 158
Score = 29.1 bits (62), Expect = 8.4
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 95 SLREFNQYRKYLYNQFMDRIHVEIKKMDERA------RDDLTLKRVETDVARRLQIFTKA 148
S E+ +Y+K L + M+R ++ ERA RD L + ETD ++
Sbjct: 40 SREEYEEYQKQLVEEKMERDAQFTQRKAERATLRSHFRDKYRLPKNETDESQIQMAGGDV 99
Query: 149 EKAREHLEKVAQEHADEWAEK 169
E RE L K+ +E +E EK
Sbjct: 100 ELPRE-LAKMIEEDTEEEEEK 119
>AB042648-1|BAB55550.2| 2080|Homo sapiens bk125H2.1 protein.
Length = 2080
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 122 DERARDDLTLKRVETDVARRLQIFTKAEKAREHLEKVAQEHAD 164
DER + D+ + +E++ A RLQ F + ++ + E+V ++ D
Sbjct: 961 DERFKGDVACQVLESERAERLQAFREVQELKSKHEQVQKKLGD 1003
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.132 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,297,325
Number of Sequences: 224733
Number of extensions: 889680
Number of successful extensions: 2902
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 2837
Number of HSP's gapped (non-prelim): 100
length of query: 172
length of database: 73,234,838
effective HSP length: 85
effective length of query: 87
effective length of database: 54,132,533
effective search space: 4709530371
effective search space used: 4709530371
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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