GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003574-TA|BGIBMGA003574-PA|IPR003191|Guanylate-binding
protein
         (190 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   4.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   10.0 

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 2   VVSVVGAYRGGKSFLLNYFLRYLNSPTEKRNENGDWLGNETDPL 45
           V   +  ++ G    LN+FL+   S + K N   +W  N+ + +
Sbjct: 63  VFITIPRWKNGVPSNLNFFLKNDESESPKLNPYPNWEMNDINKI 106


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 114 YNLIGNLQEDDLQWLQLFTEYGKLLKNED 142
           Y L+ NLQ ++  W  L  E      NED
Sbjct: 80  YELVENLQANEKPWSTLPIEDLTKSDNED 108


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 114 YNLIGNLQEDDLQWLQLFTEYGKLLKNED 142
           Y L+ NLQ ++  W  L  E      NED
Sbjct: 118 YELVENLQANEKPWSTLPIEDLTKSDNED 146


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)

Query: 134 YGKLLKNEDGSKAFQ 148
           Y +L+ +EDGS+ F+
Sbjct: 576 YNRLVVSEDGSETFK 590


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 11/38 (28%), Positives = 16/38 (42%)

Query: 38  LGNETDPLVGFSWKGGFQRHTTGILMYSEPFITTTATG 75
           +G++  P   F       R+    L+Y   FITT   G
Sbjct: 208 VGSKLRPRSSFQGPPFTYRYGFSFLLYVSGFITTEVAG 245


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.139    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,747
Number of Sequences: 429
Number of extensions: 2105
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 190
length of database: 140,377
effective HSP length: 54
effective length of query: 136
effective length of database: 117,211
effective search space: 15940696
effective search space used: 15940696
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 41 (20.6 bits)