GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003573-TA|BGIBMGA003573-PA|IPR003191|Guanylate-binding
protein
         (745 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   1.7  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          25   1.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   3.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   6.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   6.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   9.1  

>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 268 EFRNALKELVPSIFAPENLNIKKINGVKVTCADMYTYFQTYMTAFNSDSMITPSSIFENT 327
           ++ +  KE +P  +  E LN   ++   VT   + TYF  + +  N+   I   +  +NT
Sbjct: 426 DYYHKYKENLPK-YTTEELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNT 484


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 268 EFRNALKELVPSIFAPENLNIKKINGVKVTCADMYTYFQTYMTAFNSDSMITPSSIFENT 327
           ++ +  KE +P  +  E LN   ++   VT   + TYF  + +  N+   I   +  +NT
Sbjct: 52  DYYHKYKENLPK-YTTEELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNT 110


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 445 NDVEPLFNEAVLAASTYFDSKRQKIPNVIDEEKNKFIQYLGKELKCLQALNLQNNRHVIT 504
           +D+   F    L     F  K    PN  D EK  F+ YL +  K L ++++++N   I 
Sbjct: 285 SDILEEFERNRLQLLESFKRKVNFYPNNQDIEK--FLNYLKRGGKTLTSISVESNTMFIN 342

Query: 505 ELK 507
            LK
Sbjct: 343 ILK 345


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 450 LFNEAVLAASTYFDSKRQKIPNVIDEEK 477
           L+N  ++  ST +  K +KIP   +E K
Sbjct: 679 LYNALLILISTVYAVKTRKIPENFNESK 706


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 450 LFNEAVLAASTYFDSKRQKIPNVIDEEK 477
           L+N  ++  ST +  K +KIP   +E K
Sbjct: 769 LYNALLILISTVYAVKTRKIPENFNESK 796


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 77  LGNETDPLIGFSWKGGSERHTTGILMYPEPFITTTAAG 114
           +G++  P   F     + R+    L+Y   FITT  AG
Sbjct: 208 VGSKLRPRSSFQGPPFTYRYGFSFLLYVSGFITTEVAG 245


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.133    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,963
Number of Sequences: 429
Number of extensions: 10147
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 7
length of query: 745
length of database: 140,377
effective HSP length: 63
effective length of query: 682
effective length of database: 113,350
effective search space: 77304700
effective search space used: 77304700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)