GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003569-TA|BGIBMGA003569-PA|IPR001254|Peptidase S1 and
S6, chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine
         (462 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    57   4e-10
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   9.4  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 56.8 bits (131), Expect = 4e-10
 Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 24/206 (11%)

Query: 21  NQQRIIGGSVVTIDRYPEVAATLVSRNGIQWLQGCGSSILNNRAVLTAAHCIYG----VM 76
           N  RI+GG+   I+ +P +A   + R     +  CG++I++ R VLTAAHCI       +
Sbjct: 157 NPSRIVGGTNTGINEFPMMAG--IKRTYEPGMI-CGATIISKRYVLTAAHCIIDENTTKL 213

Query: 77  RIRVG-----SAFGNSGGRVHQVSRYIPHPNYVAATFE----SDVAILHVSTQIVYVNNA 127
            I VG     S    +   +H +++ I HP Y     +    +D+A+L     I +  + 
Sbjct: 214 AIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKF-GDK 272

Query: 128 VRPARIAGSNY--NLADNQVVWATGWGSMSLGGAYSEQLRHVQIYTVNQDLCRARHRTTI 185
           V PA +   ++  + A + V    GWG  S  G  S  L+   +  + Q  C  ++   I
Sbjct: 273 VGPACLPFQHFLDSFAGSDVT-VLGWGHTSFNGMLSHILQKTTLNMLTQVEC-YKYYGNI 330

Query: 186 TANMLCVGRLGVAGFGQCGGDSGSPL 211
             N +C       G   C  DSG P+
Sbjct: 331 MVNAMCA---YAKGKDACQMDSGGPV 353



 Score = 47.6 bits (108), Expect = 2e-07
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 20/183 (10%)

Query: 232 NQQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFG----VM 287
           N  RI GG+   I+ +P +A    T +       CG++I++ R VLTAAHC+       +
Sbjct: 157 NPSRIVGGTNTGINEFPMMAGIKRTYEPGMI---CGATIISKRYVLTAAHCIIDENTTKL 213

Query: 288 RVRVG----SSFGNSGGRV-HQVSRYITHPNYVAVTFE----SDLAILHVSTQIAYVNNA 338
            + VG    SS   +   V H +++ I HP Y  +  +    +D+A+L     I +  + 
Sbjct: 214 AIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKF-GDK 272

Query: 339 VRPARIAGPNY--NVADNQVVWATGWGSMWLGSGHSEQLRHVQLYTVNQNLCRTRHTSVP 396
           V PA +   ++  + A + V    GWG        S  L+   L  + Q  C   + ++ 
Sbjct: 273 VGPACLPFQHFLDSFAGSDVT-VLGWGHTSFNGMLSHILQKTTLNMLTQVECYKYYGNIM 331

Query: 397 ITA 399
           + A
Sbjct: 332 VNA 334


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 302 VHQVSRYITHPNYVAVTFESDLAILHVSTQIAYVNNAVRPAR 343
           V ++S Y++    VA + E  LAI H   ++  ++   RP R
Sbjct: 120 VSEMSSYVSVLTIVAFSMERYLAICH-PLRVYTISGLKRPIR 160


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.134    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,022
Number of Sequences: 429
Number of extensions: 5007
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 3
length of query: 462
length of database: 140,377
effective HSP length: 60
effective length of query: 402
effective length of database: 114,637
effective search space: 46084074
effective search space used: 46084074
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 45 (22.2 bits)