GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003566-TA|BGIBMGA003566-PA|IPR001254|Peptidase S1 and
S6, chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine
         (256 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...   111   8e-27
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   0.51 
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    25   0.89 
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   8.3  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score =  111 bits (266), Expect = 8e-27
 Identities = 75/250 (30%), Positives = 120/250 (48%), Gaps = 28/250 (11%)

Query: 21  NPQRIIGGSTTTIDRYPGIVSLLFTRNWSQWWQNCGGNLLNQRSVLSAAHCTFGDQTAAW 80
           NP RI+GG+ T I+ +P +  +  T         CG  ++++R VL+AAHC   + T   
Sbjct: 157 NPSRIVGGTNTGINEFPMMAGIKRTYEPGMI---CGATIISKRYVLTAAHCIIDENTTKL 213

Query: 81  RFRVGS-TWAN----SGGVVHLLNRIIYHPNYNRFTAD----SDLCILRSSTNIVLNNNV 131
              VG   W++    +  V+H +N++I HP Y+    D    +D+ +L++  +I   + V
Sbjct: 214 AIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKV 273

Query: 132 RPVNIAGANY-NLADNQPVWAAGWGATSLGGSGSEQLRHVQVWTINQNTCAQRYRPINRS 190
            P  +   ++ +      V   GWG TS  G  S  L+   +  + Q  C + Y     +
Sbjct: 274 GPACLPFQHFLDSFAGSDVTVLGWGHTSFNGMLSHILQKTTLNMLTQVECYKYY----GN 329

Query: 191 ITANMLCSGVLDVGGRDQCQGDSGGPLLHNN------VLVGVCSWGQYCADRRYPGVNVR 244
           I  N +C+      G+D CQ DSGGP+L  N      V +G+ SWG  C   +YP  N +
Sbjct: 330 IMVNAMCA---YAKGKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAECG--KYPNGNTK 384

Query: 245 VSRFTSWIQS 254
           V  +  WI S
Sbjct: 385 VGSYIDWIVS 394


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 90  NSGGVVHLLNRIIYHPNYNRFTADSD-LC 117
           N GGV HL N  ++H N++     S  LC
Sbjct: 269 NYGGVYHLDNHHVHHANHHAILGHSGFLC 297


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 147 QPVWAAGWGATSLGGSGSEQLRHVQVW---TINQNTCAQRYRPI-NRSITA 193
           +PVWA G G T+      E    ++ W    +NQ T A+  R I   S+TA
Sbjct: 164 EPVWAIGTGKTATPQQAQEVHEKLRNWFSKNVNQ-TVAETVRIIYGGSVTA 213


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/22 (31%), Positives = 13/22 (59%)

Query: 98  LNRIIYHPNYNRFTADSDLCIL 119
           +N + Y P    ++ADS +C +
Sbjct: 182 VNLVEYPPESGNYSADSAMCAM 203


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.134    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,549
Number of Sequences: 429
Number of extensions: 3323
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 256
length of database: 140,377
effective HSP length: 56
effective length of query: 200
effective length of database: 116,353
effective search space: 23270600
effective search space used: 23270600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)