GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003561-TA|BGIBMGA003561-PA|IPR008352|p38 MAP kinase,
IPR011009|Protein kinase-like, IPR000719|Protein kinase,
IPR002290|Serine/threonine protein kinase
         (283 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    89   4e-20
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    68   8e-14
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    68   8e-14
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    64   2e-12
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                57   2e-10
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    52   4e-09
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    49   4e-08
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    26   0.44 
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    25   0.76 
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    23   4.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.4  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 89.0 bits (211), Expect = 4e-20
 Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 7/162 (4%)

Query: 13  KTLEDFQQVYLVTHL-MGADLNNIVRTQKLSDDHV-QFLVYQILRGLKYIHSAGIIHRDL 70
           KT +D + +Y++    +G +L  ++R +   DD   +F    ++    Y+HS  II+RDL
Sbjct: 433 KTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYRDL 492

Query: 71  KPSNIAVNEDCELKILDFGLARPTE--TEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 128
           KP N+ ++    +K++DFG A+  +   +   +  T  Y APE++LN  H + + D WS+
Sbjct: 493 KPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGTPEYVAPEVILNKGH-DISADYWSL 551

Query: 129 GCIMAELLTGRTLFPGTDHIHQLNLIMEILGTPAQEFMQKIS 170
           G +M ELLTG   F G D +   N+I++  G  A EF + I+
Sbjct: 552 GVLMFELLTGTPPFTGGDPMKTYNIILK--GIDAIEFPRSIT 591


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 68.1 bits (159), Expect = 8e-14
 Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 6/136 (4%)

Query: 21  VYLVTHLMGADLNNIVRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 80
           V L++  +  DL   +R      + +Q +   +L G++Y+HS G++HRD+K  N+ ++ +
Sbjct: 675 VLLISDRLSRDLYCGIRAGLSWLERIQ-IALDVLEGIRYLHSQGLVHRDVKLKNVLLDIE 733

Query: 81  CELKILDFGLARPTETEMTG-YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 139
              K+ DFG    TE  M G  V T  + APE++    HY+ +VD+++ G +   L  G 
Sbjct: 734 NRAKLTDFGFC-ITEVMMLGSIVGTPVHMAPELLSG--HYDSSVDVYAFGILFWYLCAGH 790

Query: 140 TLFPGT-DHIHQLNLI 154
              P T +  H   L+
Sbjct: 791 VRLPYTFEQFHNKELL 806


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 68.1 bits (159), Expect = 8e-14
 Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 6/136 (4%)

Query: 21  VYLVTHLMGADLNNIVRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 80
           V L++  +  DL   +R      + +Q +   +L G++Y+HS G++HRD+K  N+ ++ +
Sbjct: 713 VLLISDRLSRDLYCGIRAGLSWLERIQ-IALDVLEGIRYLHSQGLVHRDVKLKNVLLDIE 771

Query: 81  CELKILDFGLARPTETEMTG-YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 139
              K+ DFG    TE  M G  V T  + APE++    HY+ +VD+++ G +   L  G 
Sbjct: 772 NRAKLTDFGFC-ITEVMMLGSIVGTPVHMAPELLSG--HYDSSVDVYAFGILFWYLCAGH 828

Query: 140 TLFPGT-DHIHQLNLI 154
              P T +  H   L+
Sbjct: 829 VRLPYTFEQFHNKELL 844


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 63.7 bits (148), Expect = 2e-12
 Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 8/116 (6%)

Query: 42  SDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE---LKILDFGLARPTETEM 98
           S+      + QIL  + + H  G++HRDLKP N+ +    +   +K+ DFGLA   + E 
Sbjct: 7   SEADASHCIQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEA 66

Query: 99  T---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIHQL 151
               G+  T  Y +PE+ L    Y + VDIW+ G I+  LL G   F   D  H+L
Sbjct: 67  QAWFGFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ-HRL 120



 Score = 25.0 bits (52), Expect = 0.76
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 198 PLAINXXXXXXXXDADKRITAEQALAHEYLAQ 229
           P A N        +  KRITA +AL H ++ Q
Sbjct: 141 PEAKNLINQMLTVNPSKRITASEALKHPWICQ 172


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 56.8 bits (131), Expect = 2e-10
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 5/140 (3%)

Query: 15  LEDFQQVYLVT-HLMGADLNNIVRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPS 73
           +E    + L+T  L G  L N +    L  +    ++  I   L++ H+AGI+H D+KP 
Sbjct: 125 IEQGASLSLITMELCGTTLQNRLDEAILIKNERICILKSITCALQFCHNAGIVHADVKPK 184

Query: 74  NIAVNEDCELKILDFG--LARPTETEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 131
           NI ++++ + K+ DFG  +      E+  +  T  Y APE+ +         DI+S+G +
Sbjct: 185 NILMSKNGQPKLTDFGSSVLIGAPNEIDKFYGTPGYTAPEV-IKQNRPTPAADIYSLGIV 243

Query: 132 MAELLTGRTLFPGTDHIHQL 151
             ++L  +  F G  H H +
Sbjct: 244 AWQMLFRKLPFAGL-HSHTI 262


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 52.4 bits (120), Expect = 4e-09
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 7/91 (7%)

Query: 53  ILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARPTETEMTGYVATRW------ 106
           I  G++Y+     +HRDL   N+ VN     KI DFGL+R  E+   G   TR       
Sbjct: 744 IASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKIPVR 803

Query: 107 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 137
           + APE  + +  +    D+WS+G +  E+++
Sbjct: 804 WTAPE-AIAFRKFTSASDVWSMGIVCWEVMS 833


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 49.2 bits (112), Expect = 4e-08
 Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 22  YLVTHLMGADLN-NIVRTQKLSDDHVQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 80
           +++ ++ G DL   I +  K  +    F   +I  GL ++H  GI++RDLK  N+ +++D
Sbjct: 62  FVMEYVNGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQD 121

Query: 81  CELKILDFGLAR 92
             +KI DFG+ +
Sbjct: 122 GHIKIADFGMCK 133


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 14/40 (35%), Positives = 18/40 (45%)

Query: 152 NLIMEILGTPAQEFMQKISSESARNYIQSLPALKRRDFRE 191
           N+I EI+ T  QE       ES     QS+   K  D R+
Sbjct: 280 NIISEIIETTIQEKRDDAKDESVEAIFQSILRQKNLDIRD 319


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 239 SAPYDQSFEDMELPVDKWKELVWKEVVEFKPHPQHMNTVVE 279
           S  YD + ++    VD+W+ + +  V  +K  P  +N + E
Sbjct: 60  SGEYDHT-KNYPFDVDQWRGMTFVTVPRYKGVPSSLNVISE 99


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)

Query: 119 YNQTVDIWSVGCIM 132
           Y + +D+W  GC+M
Sbjct: 258 YVKALDVWMAGCMM 271


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 27  LMGADLNNIVRTQKLSDDHVQFLV 50
           L G D+   +   K   DHVQFL+
Sbjct: 157 LHGTDIEMRILKTKNECDHVQFLI 180


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 27  LMGADLNNIVRTQKLSDDHVQFLV 50
           L G D+   +   K   DHVQFL+
Sbjct: 157 LHGTDIEMRILKTKNECDHVQFLI 180


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.136    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,064
Number of Sequences: 429
Number of extensions: 2861
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 13
length of query: 283
length of database: 140,377
effective HSP length: 57
effective length of query: 226
effective length of database: 115,924
effective search space: 26198824
effective search space used: 26198824
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)