GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003541-TA|BGIBMGA003541-PA|undefined
         (500 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    25   1.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   3.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   4.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   4.4  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 47  LDSTLSYSDIENDNEVSGALLHKFNMKLKDFEERG 81
           L ++L+  +  ND+++   L+  F  K + F ERG
Sbjct: 287 LQNSLNGKNFNNDDDIKSYLIQFFANKNQKFYERG 321


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 371 DIGMRKTQKRGKTTVFKMFEKKDLLQCAEVFKNSNSTQQHVI 412
           D+    T    K   FKM E++  +Q  +  +      QHVI
Sbjct: 394 DLRTLNTLHSEKLLAFKMTEQQQQMQAQQQHQQQQQQTQHVI 435


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 378 QKRGKTTVFKMFEKKDLLQCAEVFKNSN 405
           +K+ K + F MF+K   L+ +  FK +N
Sbjct: 452 EKKDKNSFFNMFKKFASLKKSPYFKEAN 479


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 378 QKRGKTTVFKMFEKKDLLQCAEVFKNSN 405
           +K+ K + F MF+K   L+ +  FK +N
Sbjct: 452 EKKDKNSFFNMFKKFASLKKSPYFKEAN 479


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.133    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,255
Number of Sequences: 429
Number of extensions: 4974
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 4
length of query: 500
length of database: 140,377
effective HSP length: 61
effective length of query: 439
effective length of database: 114,208
effective search space: 50137312
effective search space used: 50137312
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)