GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003533-TA|BGIBMGA003533-PA|undefined
         (127 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   0.46 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   0.46 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   3.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   7.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   9.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   9.8  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.2 bits (50), Expect = 0.46
 Identities = 11/23 (47%), Positives = 12/23 (52%)

Query: 94  LQNVGSDFCEALNGLNDSAANVD 116
           L N+  D C  L GL  S AN D
Sbjct: 344 LHNLQKDVCSKLKGLCPSMANYD 366


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.2 bits (50), Expect = 0.46
 Identities = 11/23 (47%), Positives = 12/23 (52%)

Query: 94  LQNVGSDFCEALNGLNDSAANVD 116
           L N+  D C  L GL  S AN D
Sbjct: 434 LHNLQKDVCSKLKGLCPSMANYD 456


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 22  VRVWKKPPLVYCDYHGHS 39
           +R W+ P +V  DY  +S
Sbjct: 280 LRYWRTPSVVVSDYSDYS 297


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query: 89  LNTQHLQNVGSDFCEALNGL 108
           +N     N G   CEA+NG+
Sbjct: 742 INNIQKTNEGYYLCEAVNGI 761


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
          monooxygenase protein.
          Length = 548

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 21 LVRVWKKPPLVYC 33
          +V++W  P LV C
Sbjct: 80 VVKIWVGPKLVIC 92


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)

Query: 73  PALMHRISPAFA 84
           P L+ R SPAF+
Sbjct: 918 PGLLERASPAFS 929


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.138    0.441 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,566
Number of Sequences: 429
Number of extensions: 1229
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 127
length of database: 140,377
effective HSP length: 51
effective length of query: 76
effective length of database: 118,498
effective search space:  9005848
effective search space used:  9005848
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.0 bits)
S2: 39 (19.8 bits)