GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003527-TA|BGIBMGA003527-PA|undefined
         (158 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   1.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   1.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   3.3  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   3.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   3.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   5.8  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 71  AGDRMYELYK-EYEDQSSPEAKFAKDLDRYDMILQAFEYEKRENTPK 116
           A D+  E +  EY+     +  F KD    DM+ +    EKR+N  K
Sbjct: 427 AADQKLEKHLIEYKKMLKIKRLFGKDRKIMDMVREKIIEEKRKNKNK 473


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 65  SGLTGIAGDRMYELYKEYEDQSSPEAKFAKDLDRYDMILQA 105
           +G  G  G R Y     YED +    +FA+++D   + ++A
Sbjct: 597 AGGAGGGGARSYVDPHTYEDPNQAVREFAREIDAGYITIEA 637


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)

Query: 2   YRMGIMTFLLTEE 14
           YR+GI+ FL TE+
Sbjct: 158 YRLGILGFLSTED 170


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)

Query: 2  YRMGIMTFLLTEE 14
          YR+GI+ FL TE+
Sbjct: 29 YRLGILGFLSTED 41


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)

Query: 2   YRMGIMTFLLTEE 14
           YR+GI+ FL TE+
Sbjct: 158 YRLGILGFLSTED 170


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 93  AKDLDRYDMILQAFEYEKREN 113
           A  +DRY  + Q  +Y K +N
Sbjct: 279 AISIDRYIAVTQPIKYAKHKN 299


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.137    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,605
Number of Sequences: 429
Number of extensions: 1955
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 158
length of database: 140,377
effective HSP length: 53
effective length of query: 105
effective length of database: 117,640
effective search space: 12352200
effective search space used: 12352200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)