GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003514-TA|BGIBMGA003514-PA|undefined
         (243 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   1.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.9  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   3.4  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             23   3.4  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.8  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 16/131 (12%)

Query: 46  SKILDEKSPSSH----DKLILEKPTNEIFVEYPSNKEVMKRD---LCQKRFSVDYKRSRL 98
           S I+D +SPSS       L+  +P  +   E   N     +D   L Q     D  +   
Sbjct: 30  SSIVDRRSPSSSRSPSPSLLTSQPHQDHNKEKSKNNHHCNQDTEKLNQLEIESDNSKEVN 89

Query: 99  DFKR--FSVDCRRNSXXXXXXXXXXXXXXXXNVDVR-PEPRRKSSGILKSTVHNSGDINE 155
           D K   F VD  RN                 NV ++  E +R+   +    +  +  I+ 
Sbjct: 90  DKKEENFIVDRLRNDLFECENKEKS------NVCLKFEEQKRRKKSLDDVKILRNDRIDS 143

Query: 156 YKTSIKQDSCS 166
           YK+++K D CS
Sbjct: 144 YKSNLKCDKCS 154


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/47 (23%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 134 EPRRKSSGILKSTVHNSGDINEYKTSIKQDSCSDDDDVFEESTNKGD 180
           EP++ +   L  +  N  + +EYK S+ ++S + +  +   + N+G+
Sbjct: 431 EPKKDNKRKLSDSTMNKINNHEYKRSVSRES-NSNQFILMTTVNEGN 476


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 149 NSGDINEYKTSIKQD-SCSDDDDVFEESTNKGDGAGSPK 186
           NSG INE + + +    C+D     EE T +G G G  K
Sbjct: 51  NSGTINESEFNDENYWQCNDKKTDIEE-TGRGKGRGHGK 88


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/46 (26%), Positives = 20/46 (43%)

Query: 9   ITEQVTDDTSEIIEKDNQLKVTKDSGLDECSFITDEESKILDEKSP 54
           ++  V   T  I+EK  +L    D G      +TD E+ +    +P
Sbjct: 102 VSYNVAVPTKSILEKKPELVDATDPGEHNGDTVTDVEAGLASRTNP 147


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 152 DINEYKTSI-KQDSCSDDDDVFEESTNKGDGAGSPKDPP 189
           +I E ++ + K   C+     FE   N G G+  P+D P
Sbjct: 31  EIQELRSHLDKFLQCASLKLAFEPRRNPGPGSKGPRDFP 69


>AF388659-1|AAK71995.1|  782|Apis mellifera
          1D-myo-inositol-trisphosphate 3-kinaseisoform A
          protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)

Query: 77 KEVMKRDLCQKRFSV 91
          ++++KR LC+KR  V
Sbjct: 73 RQLLKRQLCEKRKEV 87


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.132    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,447
Number of Sequences: 429
Number of extensions: 3086
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 6
length of query: 243
length of database: 140,377
effective HSP length: 56
effective length of query: 187
effective length of database: 116,353
effective search space: 21758011
effective search space used: 21758011
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 43 (21.4 bits)