GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003513-TA|BGIBMGA003513-PA|IPR007229|Nicotinate
phosphoribosyltransferase and related, IPR006405|Nicotinate
phosphoribosyltransferase related
         (572 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    24   3.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   5.2  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 291 YNSNCGTNGTI-VQIAPTIHSTYGSSTVERTLRSGLLNFCAVALALNDCGYRAVGI 345
           Y S   ++G   V  AP + S +G + V+      +LN  ++A A++  G   VG+
Sbjct: 264 YYSPLASHGLYYVNTAPFMKSQFGENNVQYQGSEDILNTQSLAKAVSKNGVLFVGL 319


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 236 STEESSDGELAALISY-AIAFPTGFLALVDTYDVKRYNFQGLTSRHRQRITNG 287
           STE +  GE+A+L  Y  +A P+G  A   +  +      G    HR+R  +G
Sbjct: 495 STESTCSGEVASLTEYHHVAPPSGHHA--SSAPLLAATLAGGLCPHRRRANSG 545


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.136    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,616
Number of Sequences: 429
Number of extensions: 6892
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 2
length of query: 572
length of database: 140,377
effective HSP length: 61
effective length of query: 511
effective length of database: 114,208
effective search space: 58360288
effective search space used: 58360288
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)