GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003502-TA|BGIBMGA003502-PA|undefined
         (190 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   5.7  
AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced prot...    21   7.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.5  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 42  SSHPLSNYADIYEGNNDTTLRAEER 66
           +S  +S YA+ +E +  TTL A  R
Sbjct: 932 ASIKMSRYAESFERSGVTTLEAAAR 956


>AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced
          protein 75 protein.
          Length = 58

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query: 36 GPLYSPSSHPLSN 48
          G + SPSS PL N
Sbjct: 20 GDILSPSSEPLDN 32


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced
          protein 75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query: 36 GPLYSPSSHPLSN 48
          G + SPSS PL N
Sbjct: 20 GDILSPSSEPLDN 32


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.310    0.130    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,128
Number of Sequences: 429
Number of extensions: 2746
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 190
length of database: 140,377
effective HSP length: 54
effective length of query: 136
effective length of database: 117,211
effective search space: 15940696
effective search space used: 15940696
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.3 bits)
S2: 41 (20.6 bits)