GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003495-TA|BGIBMGA003495-PA|IPR002048|Calcium-binding
EF-hand
         (354 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   9.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   9.2  
AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic hor...    22   9.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 249 QKVRKRSYTVSEKPTNAFQKTTTDSNGNGYLDLA 282
           Q+  KRS ++ E  ++  Q+++TDS  N  L LA
Sbjct: 860 QQKAKRSKSLQEVSSDKLQESSTDSR-NPALALA 892


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 249 QKVRKRSYTVSEKPTNAFQKTTTDSNGNGYLDLA 282
           Q+  KRS ++ E  ++  Q+++TDS  N  L LA
Sbjct: 898 QQKAKRSKSLQEVSSDKLQESSTDSR-NPALALA 930


>AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic
           hormone-I protein.
          Length = 52

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)

Query: 209 LQRRELLEIIQANMEKNHLSFQASRKPCESIG 240
           L++R LLE+ +    ++     A+R+  E+IG
Sbjct: 20  LRQRVLLELARRKALQDQAQIDANRRLLETIG 51


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.130    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,079
Number of Sequences: 429
Number of extensions: 3157
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 3
length of query: 354
length of database: 140,377
effective HSP length: 58
effective length of query: 296
effective length of database: 115,495
effective search space: 34186520
effective search space used: 34186520
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 44 (21.8 bits)