Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003487-TA|BGIBMGA003487-PA|undefined
(251 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 25 0.87
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 23 2.0
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 2.0
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 23 2.0
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 23 2.0
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 2.7
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 22 6.1
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 8.1
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 8.1
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 24.6 bits (51), Expect = 0.87
Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Query: 85 GISMSPAPKETILSLIPRSARVSHEHTDSGLGADQDYAYSSESSCTAVADCCAKTVTTYN 144
G+++SP + P S + + +T+S + ++ V D
Sbjct: 254 GMALSPVTHNLYYNS-PSSENLYYVNTESLMKSENQGNDVQYERVQDVFDSQLTVKAVSK 312
Query: 145 RGVSLEGIGSLAINCWDTQRHASNNNI 171
GV L G+ + ++CW+ + NI
Sbjct: 313 NGVLLFGLANNTLSCWNEHQSLDRQNI 339
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 23.4 bits (48), Expect = 2.0
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Query: 85 GISMSPAPKETILSLIPRSARVSHEHTDSGLGADQDYAYSSESSCTAVADCCAKTVTTYN 144
G+++SP S + S + + +T+ +D + D +
Sbjct: 255 GMALSPMTNNLYYSPVA-STSLYYVNTEQFRTSDYQQNDIHYEGVQNILDTQSSAKVVSK 313
Query: 145 RGVSLEG-IGSLAINCWDTQRHASNNNI 171
GV G +G A+ CW+ R +NI
Sbjct: 314 SGVLFFGLVGDSALGCWNEHRTLERHNI 341
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 23.4 bits (48), Expect = 2.0
Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 25 ITTPSSDYSNHHLLQLRCSR-WVLGLELDTNTGLVDNSLMPRVNCLVVQAG 74
+T SS++ + + ++++ WV + + + T + + MP V C+V +G
Sbjct: 95 LTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSG 145
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.4 bits (48), Expect = 2.0
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Query: 85 GISMSPAPKETILSLIPRSARVSHEHTDSGLGADQDYAYSSESSCTAVADCCAKTVTTYN 144
G+++SP S + S + + +T+ +D + D +
Sbjct: 255 GMALSPMTNNLYYSPVA-STSLYYVNTEQFRTSDYQQNDIHYEGVQNILDTQSSAKVVSK 313
Query: 145 RGVSLEG-IGSLAINCWDTQRHASNNNI 171
GV G +G A+ CW+ R +NI
Sbjct: 314 SGVLFFGLVGDSALGCWNEHRTLERHNI 341
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.4 bits (48), Expect = 2.0
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Query: 85 GISMSPAPKETILSLIPRSARVSHEHTDSGLGADQDYAYSSESSCTAVADCCAKTVTTYN 144
G+++SP S + S + + +T+ +D + D +
Sbjct: 255 GMALSPMTNNLYYSPVA-STSLYYVNTEQFRTSDYQQNDIHYEGVQNILDTQSSAKVVSK 313
Query: 145 RGVSLEG-IGSLAINCWDTQRHASNNNI 171
GV G +G A+ CW+ R +NI
Sbjct: 314 SGVLFFGLVGDSALGCWNEHRTLERHNI 341
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.0 bits (47), Expect = 2.7
Identities = 6/24 (25%), Positives = 16/24 (66%)
Query: 87 SMSPAPKETILSLIPRSARVSHEH 110
S+SP+ ++ + ++P++ + H H
Sbjct: 547 SLSPSENQSKMEILPKTTQRQHHH 570
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 137 AKTVTTYNRGVSLEG-IGSLAINCWDTQRHASNNNI 171
AK V+ GV G +G+ A+ CW+ + N+
Sbjct: 306 AKAVS--KNGVLFVGLVGNSAVGCWNEHQSLQRQNL 339
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 173 VGESGSLARRYARPSRESRDHNANLPRTHSR 203
+ +SG+ +++YA S R+ + T SR
Sbjct: 200 IKKSGNESKKYATSSNSLRNRTHDFQHTSSR 230
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 8.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 187 SRESRDHNANLPRTHSRPVTRHDNTLDIILKPL 219
S + + N +H+ RH +TLDI K L
Sbjct: 221 SNSIKHESDNSDYSHTTDENRHSSTLDIDHKML 253
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.133 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,653
Number of Sequences: 429
Number of extensions: 3260
Number of successful extensions: 29
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 22
Number of HSP's gapped (non-prelim): 9
length of query: 251
length of database: 140,377
effective HSP length: 56
effective length of query: 195
effective length of database: 116,353
effective search space: 22688835
effective search space used: 22688835
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)
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