GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003476-TA|BGIBMGA003476-PA|undefined
         (156 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   2.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   4.3  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 29 SYRHSPHELAAYATDSKVPVQPDVYEQGMESIDEKTPIDLI 69
          S   SP EL A       P  P    +GM  +  + P D +
Sbjct: 33 SVEFSPMELNALVGTPAAPNMPAEEGEGMAGVTGEEPFDTL 73


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)

Query: 91  ISGQLEDGQLVTGGG 105
           IS + ++GQ V+GGG
Sbjct: 955 ISVKFQEGQTVSGGG 969


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.135    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,828
Number of Sequences: 429
Number of extensions: 2050
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 156
length of database: 140,377
effective HSP length: 53
effective length of query: 103
effective length of database: 117,640
effective search space: 12116920
effective search space used: 12116920
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)
S2: 41 (20.6 bits)